| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1589 |
|---|
| Symbol | |
|---|
| ID | 3960640 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 1720115 |
|---|
| End bp | 1720969 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637916413 |
|---|
| Product | AAA_5 ATPase |
|---|
| Protein accession | YP_522852 |
|---|
| Protein GI | 89900381 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0714] MoxR-like ATPases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.566046 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTCC ACGGAACCAA AAACTACGTC GCCACCCCGG ATCTGATGCT GTCGGTCAAT
GCGGCCATCA CGCTCAAGCG GCCACTGCTG GTCAAGGGTG AGCCCGGCAC CGGCAAAACC
ATGCTGGCCG AGGAGGTGGC AGGCGCCTTG AACATGCCGC TGCTGCAGTG GCATATCAAG
TCGACCACCA AGGCGCAGCA GGGCCTGTAT GAATACGACG CGGTCAGCCG CCTGCGCGAC
TCTCAGCTGT CCAGCCTGGA CGGCGGTGAG CGGGTCAAGA ACATCCACAA CTACATCCTC
AAGGGTGTGT TGTGGCAGGC CTTTACCGCC GACGAGCCGG TGGCCTTGCT GATTGATGAA
ATTGACAAGG CGGACATTGA ATTTCCGAAC GACTTGCTGC GCGAAATTGA TCGCATGGAG
TTCTATTGCT ACGAAACCCG TGAGTTGATC CAGGCCAAAA ACCGGCCGCT GGTGTTCATC
ACCTCCAACA ACGAAAAAGA GCTGCCGGAT GCCTTTTTGC GCCGCTGCTT CTTTCACTAC
ATCAAGTTTC CCGACGCCGA CACCATGCGC AACATTGTCG ACGTGCACTT TCCGGGCCTG
AAAAAAGAAC TTTTGAGTGC CGCCATGAAG ACGTTTTACG ACGTGCGCAA CCTGCCGGGC
CTGAAAAAGA AGCCTTCCAC CAGCGAGTTG CTGGATTGGC TCAAGCTGCT GCTGGCCGAA
GACATTCCCC TCGATGTGCT ACAAACTCCG GTCGACAAAG TGGCGGTGCC GCCGCTGGTG
GGCGCACTGC TGAAGAACGA GCAGGATGTG AGTTTGTTTG AAAAACTGGT GTTTATGCAA
CGGCACAACC GCTGA
|
|---|
| Protein sequence | MKFHGTKNYV ATPDLMLSVN AAITLKRPLL VKGEPGTGKT MLAEEVAGAL NMPLLQWHIK
STTKAQQGLY EYDAVSRLRD SQLSSLDGGE RVKNIHNYIL KGVLWQAFTA DEPVALLIDE
IDKADIEFPN DLLREIDRME FYCYETRELI QAKNRPLVFI TSNNEKELPD AFLRRCFFHY
IKFPDADTMR NIVDVHFPGL KKELLSAAMK TFYDVRNLPG LKKKPSTSEL LDWLKLLLAE
DIPLDVLQTP VDKVAVPPLV GALLKNEQDV SLFEKLVFMQ RHNR
|
|---|
| |