Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1579 |
Symbol | |
ID | 3960916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 1710266 |
End bp | 1710736 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637916403 |
Product | hypothetical protein |
Protein accession | YP_522842 |
Protein GI | 89900371 |
COG category | [S] Function unknown |
COG ID | [COG1238] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.49497 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACGCCT GGCTCGAAAC ACTCATCACC CTACTGGCAC TGCCGCAATT TGGCCTCAGC ACCGTGTTTG TGGTGTCGTT CATTTCTGCC ACCTTGCTGC CGCTGGGCTC CGAACCGGTG GTGTTTGGGC TGGTCCAACT TTCTCCCCAT CTGTTTTGGC CCACGATTGC CGTGGCCACC GTTGGCAACA CCCTGGGCGG TATGGTGACC TGGGCCATGG GGCTGGCGTC CCACCAGGTG GTTGACAAAT ACGGGCACTC CAACCACCAC CTGCGCGCGC TGGACTGGTT GCAGCGGCTC GGCCCCAAAG CCTGCCTGCT GGCATGGCTC CCCGTGGTGG GCGACCCGCT GTGTGCCGTG GCCGGCTGGA TCAAGTTGCC CTTCTGGCCT TGCGTGGCCT ACATGGCCAT TGGCAAGCTG GCCCGCTACA CCCTGATGAC GGCGGGACTC ATCGGGCTGT TTGGCGCCTA G
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Protein sequence | MHAWLETLIT LLALPQFGLS TVFVVSFISA TLLPLGSEPV VFGLVQLSPH LFWPTIAVAT VGNTLGGMVT WAMGLASHQV VDKYGHSNHH LRALDWLQRL GPKACLLAWL PVVGDPLCAV AGWIKLPFWP CVAYMAIGKL ARYTLMTAGL IGLFGA
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