Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1571 |
Symbol | |
ID | 3960907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 1698030 |
End bp | 1700672 |
Gene Length | 2643 bp |
Protein Length | 880 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637916394 |
Product | DNA gyrase subunit A |
Protein accession | YP_522834 |
Protein GI | 89900363 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.612234 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCAAT TCGCCAAAGA AACCCTGCCC GTCAGCCTTG AAGAGGAAAT GCGGCGCAGT TACCTCGATT ACGCCATGAG CGTGATTGTG GGCCGTGCCC TGCCCGATGC GCGGGACGGT TTGAAACCAG TGCATCGCCG TGTGCTGTTT GCGATGCACG AACTCAATAA CGACTGGAAC CGGCCGTATA AGAAATCGGC ACGTATCGTC GGCGACGTGA TTGGCAAGTA CCACCCGCAC GGTGACCAGT CTGTCTACGA CACCATCGTG CGGATGGCGC AGGATTTTTC CATGCGCCAC ATGCTGGTCG ACGGGCAAGG CAACTTTGGC TCGGTCGACG GCGACAACGC AGCGGCCATG CGTTACACCG AAATCCGCCT GTCCAAGATC GCCCACGAGC TGCTGGCTGA TCTGGACAAG GAGACCGTTG ATTTCGGCCC CAATTACGAC GGTTCCGAAA AAGAACCGCT GGTGCTGCCA ACCCGCCTGC CCAACCTGCT GGTCAACGGC TCCGGTGGCA TTGCCGTGGG TATGGCCACC AACATCCCGC CGCACAACCT GAATGAAGTG GTGGATGCCT GCCTGCACCT GCTGCGCAAC CCGGAGGCCT CGATTGACGA ACTGATGGAG ATCATTCCGG CGCCCGATTT CCCCACCGCC GGCATCATTT ACGGCATCCA GGGTGTCAAG GACGGCTATC GCACCGGTCG GGGTCGGGTG GTGATGCGCG CCAAGGTGCA TTTCGAAGAC ATCGACAAAG GCCAGCGCCA GTCCATCATC GTCGACGAGC TGCCCTACCA GGTCAACAAA AAGACACTGC AAGAGCGCAT GGCCGAACTG GTGCACGAGA AGAAAATCGA GGGCATCAGC CACATCCAGG ACGAATCCGA CAAATCCGGC ATGCGGCTGG TGATTGAACT CAAGCGCGGC GAGGTGCCCG AGGTGGTGCT CAACAACCTG TACAAGCAAA CGCAGCTGCA GGACACCTTT GGCATGAACA TGGTGGCGCT GATCGACGGC CAGCCCAAGC TGTGCAACCT CAAAGACCTG ATTAAAGTGT TTTTGCAGCA CCGCCGCGAG GTGGTGACCC GTCGCACAGT GTTCAATCTG CGCAAGGCGC GCGAGCGCGG CCACGTGCTC GAAGGCCTGG CCGTTGCGCT GGCCAATATC GACGAATTCA TCGCCATCAT CCGCAACGCC CCCACACCAC CGGTGGCCAA GGTCGAACTG ATGGCCAAGC CCTGGGACAG TAAATTGGTG CGCGAAATGC TGACCCGCAC CCGCGCCGAC GGCGGCGTGA TCAACGCCGA CGACTACCGC CCCGACGGCC TGGAGAAGAT GTACGGCATG GGCAGCGATG GCCTGTACCG CCTGTCCGAC ACGCAGGCGC AGGAAATTCT GCAGATGCGT TTGCAGCGCC TGACCGGCCT GGAGCAGGAC AAAATCGTCG CCGAATACAA AGAGGTGATG GGCGAGATCG AAGACTTGCT CGACATTCTT GCCAAGTCCG AACGGGTCTC CACCATCATT TACGAAGAAC TCACCGCCAT CAAGACCGAG TTTGGCCAAA CCAAACTGGG CGCGCGGCGC AGCCTGGTGG AGCACAGCTC GTTTGACTTG AGCACGGAAG ACCTGATCAC GCCCACCGAC ATGGTGGTGA CGCTCTCGCA CAGCGGCTAC ATCAAGAGCC AGCCGCTGAG TGAATACCGG GCGCAAAAGC GCGGCGGGCG CGGCAAGCAA GCCACCGCCA CCAAAGAAGA CGACTGGGTC GACCAGCTCT TCATTGCCAA CACGCACGAT TACATCCTGT GTTTCAGCAA CCGGGGTCGT CTCTACTGGC TCAAGGTTTG GGAAGTGCCC CAGGGCTCGC GCGGTTCACG CGGGCGCCCG ATCGTCAACA TGTTTCCGCT GCAAGAGGGT GAAAAGATCA ATGTGGTGCT GGCACTGACC GGCGAGAAGC GCAGCTTCCC CGCTGACCAG TACGTGTTCA TGGCCACCTC CATGGGCACC GTCAAGAAAA CACCGCTGGA CGAATTCAGC AACCCGCGCA AGGGCGGCAT CATCGCCGTC GGCCTGGATG AGGGCGACTA CCTGATCGGC GCCGCGCTGA CCGACGGCAA GCACGACGTG ATGTTGTTCA GCGATGGTGG CAAGGCGGTG CGCTTTGACG AGAACGATGT GCGCCCGATG GGCCGCAATG CCCGAGGCGT GCGCGGCATG ATGCTGGAAG ACGGCCAGGG CGTGATCGCC ATGCTGGTGG CCGAGGATGA GTTGCAAAGC GTGCTGACCG CGACCGTCAA CGGCTATGGC AAGCGCACCA GCATCACCGA GTACACCCGC CATGGCCGCG GTACCAAGGG CATGATTGCC ATCACCCAGT CCGAACGCAA TGGCAAAGTG GTGGCCGCCA CCCTGGTGCA TGCCGACGAC GAAATCATGC TGATCACCGA CAAGGGCGTA CTGGTGCGCA CCCGTGTCTC CGAAATTCGC GAACTGGGCC GCGCCACGCA GGGCGTGACG CTGATTGGGC TCGACGAAGG CTCCAAATTG AGCGGACTGC AGCGGATTGT CGAAAATGAC GCCAACCCGG TGGCTGATGA AACCCCCGGT GACGATCAGG ACGACACCAG CAGCACCGAC TAA
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Protein sequence | MTQFAKETLP VSLEEEMRRS YLDYAMSVIV GRALPDARDG LKPVHRRVLF AMHELNNDWN RPYKKSARIV GDVIGKYHPH GDQSVYDTIV RMAQDFSMRH MLVDGQGNFG SVDGDNAAAM RYTEIRLSKI AHELLADLDK ETVDFGPNYD GSEKEPLVLP TRLPNLLVNG SGGIAVGMAT NIPPHNLNEV VDACLHLLRN PEASIDELME IIPAPDFPTA GIIYGIQGVK DGYRTGRGRV VMRAKVHFED IDKGQRQSII VDELPYQVNK KTLQERMAEL VHEKKIEGIS HIQDESDKSG MRLVIELKRG EVPEVVLNNL YKQTQLQDTF GMNMVALIDG QPKLCNLKDL IKVFLQHRRE VVTRRTVFNL RKARERGHVL EGLAVALANI DEFIAIIRNA PTPPVAKVEL MAKPWDSKLV REMLTRTRAD GGVINADDYR PDGLEKMYGM GSDGLYRLSD TQAQEILQMR LQRLTGLEQD KIVAEYKEVM GEIEDLLDIL AKSERVSTII YEELTAIKTE FGQTKLGARR SLVEHSSFDL STEDLITPTD MVVTLSHSGY IKSQPLSEYR AQKRGGRGKQ ATATKEDDWV DQLFIANTHD YILCFSNRGR LYWLKVWEVP QGSRGSRGRP IVNMFPLQEG EKINVVLALT GEKRSFPADQ YVFMATSMGT VKKTPLDEFS NPRKGGIIAV GLDEGDYLIG AALTDGKHDV MLFSDGGKAV RFDENDVRPM GRNARGVRGM MLEDGQGVIA MLVAEDELQS VLTATVNGYG KRTSITEYTR HGRGTKGMIA ITQSERNGKV VAATLVHADD EIMLITDKGV LVRTRVSEIR ELGRATQGVT LIGLDEGSKL SGLQRIVEND ANPVADETPG DDQDDTSSTD
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