Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1570 |
Symbol | |
ID | 3960906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 1696847 |
End bp | 1697959 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637916393 |
Product | phosphoserine aminotransferase |
Protein accession | YP_522833 |
Protein GI | 89900362 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG1932] Phosphoserine aminotransferase |
TIGRFAM ID | [TIGR01364] phosphoserine aminotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.205377 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCGAC CCTATAACTT CTCCGCCGGA CCCGCGGCCA TGCCGCAGGA AGTTCTGACC GAAGCGGCGG CCGAAATGCT CGACTGGCAC GGCAGCGGCA TGAGCGTCAT GGAAATGAGC CATCGCGGCC GGGAGTTCGT CTCCATTTAC GAGCAGGCGC ACTTGGATCT GCGCGAGCTG CTCGCGGTTC CGGACAGCTT CAAAATCCTG TTCATGCAGG GCGGCGGCCT GGCCGAAAAC GCGATTGTCC CGCTCAACCT GTCGGCCCGG GTGTCGCCGG CCGGTGCCGC TGGCAGCGCG GACTTTGTGG TCACCGGCGG CTGGAGCCTG AAGTCGCAAC AGGAAGCACG CAAGTACTGC ACCGTCAACA TCGCTGCCAG CAACGAGTCG GACGGCCACA CCACGCTGCC TGGACCTGCC AGCTGGCAGC TCAGTCACGG CGCCAGCTAC GTGCACATCT GCAGCAACGA GACCATTCAC GGCGTTGAAT ACCACACGCT GCCCGACCTG CAGGCGCTGG GCAGTGAGGC CGCGCTGGTG GTCGACTGTT CCTCCCACGT GGCATCGCGC CCGATCGATT GGTCGCGGGT CGGACTGGCC TTTGCGGGTG CGCAGAAAAA CCTGGGGCCT GCCGGTCTGA CGCTGGTGGT GGTGCGCGAA GACCTGCTCG GCCATGCGCT GGCGGTATGC CCCAGCGCCT TCAACTACAA GACGGTGGCG GACAACCAGT CGATGTTCAA TACCCCGCCC ACCTACGCCA TTTACATCGC GGGCCTGGTG TTCCAGTGGC TCAAGCGCCA AGGCGGCATC GCCGCGATGG AAGCGCGCAA CCAGGCCAAG GCAGCCCTGC TGTACGACGC GATTGACAAC TCGCAGCTCT ACTACAACAA AGTGGCGCCC AACTGCCGCT CACGCATGAA TGTGCCTTTT TTCTTGCGTG ATGAAAGTCT CAACGACGCA TTTTTGGCCG GAGCACGCGA GCACGGTCTG TTGCAGCTCA AGGGACACAA GTCGGTCGGC GGCATGCGCG CCAGCATTTA CAACGCCATG CCGATGGAGG GCGTGCAGGC GCTGGTGAAC TACCTGCACG AATTTCAAAA GCGCCGCAGC TGA
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Protein sequence | MNRPYNFSAG PAAMPQEVLT EAAAEMLDWH GSGMSVMEMS HRGREFVSIY EQAHLDLREL LAVPDSFKIL FMQGGGLAEN AIVPLNLSAR VSPAGAAGSA DFVVTGGWSL KSQQEARKYC TVNIAASNES DGHTTLPGPA SWQLSHGASY VHICSNETIH GVEYHTLPDL QALGSEAALV VDCSSHVASR PIDWSRVGLA FAGAQKNLGP AGLTLVVVRE DLLGHALAVC PSAFNYKTVA DNQSMFNTPP TYAIYIAGLV FQWLKRQGGI AAMEARNQAK AALLYDAIDN SQLYYNKVAP NCRSRMNVPF FLRDESLNDA FLAGAREHGL LQLKGHKSVG GMRASIYNAM PMEGVQALVN YLHEFQKRRS
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