Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1552 |
Symbol | |
ID | 3960541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 1672046 |
End bp | 1675228 |
Gene Length | 3183 bp |
Protein Length | 1060 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637916371 |
Product | acriflavin resistance protein |
Protein accession | YP_522815 |
Protein GI | 89900344 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACACC ACCAATCCAA AAAGAGTTTC AATCTGTCCA GGTGGGCGCT GGAGCATGCG GCGCTGACCC GGTTTTTGAT GCTGGTGCTG CTGCTGCTGG GCGTGTCGGC GTACTTCCAG CTGGGGCAGG ATGAAGATCC GCCGTTCACT TTTCGCGCCA TGGTGGTGCG CAGCTACTGG CCCGGCGCCA CTGCCCAGCA GGTGGCGGAG CAGGTGACCG ACAAGATTGA GCGCACCCTG CAGGAAGTGC CCTACGCCGA CAAGATTCGC AGTTACTCAA AGCCGGGCGA GTCGCAGATC ATTTTCCAGA TCAAGGACTC GTCCAAGGCC AGCGAGGTCG CCAACGTCTG GTATTCGGTG CGCAAGAAGG TGGGCGACAT GCGTGGCACG CTGCCCCAGG GCGTGCTGGG CCCGTTCTTT AACGATGATT TTGGCGATGT GTTTGGCGTG ATCTATGCGC TGCAGGCCGA TGGCTTCAGC TATGCCGAGC TCAAGACCTT TGCCGACGAT GCACGCCAAC AGTTGCTGCG GGTGCCGGAT GTGGCCAAGG TGGAGCTGTT TGGTGTGCAG GACGAAAAAC TCTACATAGA AATCTCGCAA AGGCGCTTGG CCGAGCTCGG CCTGGATATG AACGCGGTGC TGGCGCAACT GGGCCAGCAA AATGTGGTCG AGTCGGCGGG CGCAGTGCAG ACGCCGCTGG ACGTGGTGCA GCTGCGGGTG GCCGGGCAGT TCAACGCGAC GGACGACTTG CGCGCCATGC CCCTACGCGG CAGCTCGGGC GCGCAACTGC GCCTTGGTGA CATTGCCAGC ATCGAGCGCG GCTACGTGGA TCCGCCTGTG ATCAAGGTGC GCCATCAGGG CCAGGAAGTG ATCGCGCTCG GGGTTGCCAT GACCAAGGGT GGCGACATCA TCGCTTTGGG AAAAGCCCTC AAGACCACGA CGCAGCGGCT GGAAAAGGCG CTGCCGGTCG GCGTGAAATT GGTGCAGATT CAGGATCAGC CGACGGCCGT GGCGACGTCG GTGCGTGAGT TTGTCAAGGT GCTGATCGAG GCGGTGACGA TCGTGCTGGT GGTCAGCTTC GTCAGCCTGG GGCTGCACAA GCGGCCCGGC CAAAACTCAC TGCTCAAACG CTGGACGCTC GACATGCGCC CCGGTCTGGT GGTGGGCATC ACCATTCCGC TGGTGCTGGC AATGACGTTC CTGGCGATGC AGTACTGGGG CATCGGATTG CACAAAATTT CACTCGGCTC GCTGATCATT GCGCTCGGGT TGCTGGTGGA CGACGCCATT ATTTCGGTCG AGATGATGGT GACCAAGATG GAGCAGGGCT ATGACAAGGT GCGCGCCGCC ACCTTTGCCT ATGAAATCAC CGCCATGCCG ATGCTCACCG GCACGCTGAT CACGGCGGCC GGTTTTTTGC CCATTGGCCT GGCTCAATCG ACCGTGGGTG AATACACTTT TGCGATTTTT GCGGTGACGG TCATTGCGCT GGTGCTGAGC TGGATCGTGT CGGTCTATTT TGTGCCTTAC CTGGGCACGC TGCTGCTCAA GGCGCCCCCG CATGTGGTGC TGGCGAACCG CGCCGGCGCG GACGAGCCAA GCGCGGGTCC CGTGCATGAT CCGTACGACA CGCCGTTTTA CAACGCATTC CGGCGCGCGG TGAACGCTTG TGTGCAGCAC CGCTGGCTCA CCCTGGGCGC GACCCTGCTG GTGTTTGCGC TGGGCATTGT GGGCATGGGC CGGGTGCAGC AACAGTTCTT TCCGGATTCG AGCCGGCCCG AAATCATCGT CGATATCTGG TCGCCCGAAG GCAGCTCGTT TGCCGCCAAT GAAGCCGTGG CCAAGCGGGT GGAGGCGCGC CTGCTGGCTG AGCCGGGCGT GGCATCCGTC ACGCAGTGGG TGGGCTCGGG GGTGCCGCGG TTTTACCTGC CGCTGGATCA GGTTTTCCCG CAGACCAATG TGTCGCAGTT CATCGTCGTG CCCGCGGACC TGAAGCTGCG TGAGTCGCTG CGGGTCAAGC TGCCGGCGCT GCTGGCGACC GAGTTCCCCG AGGTGCGCGG GCGGGTCAAG CTCTTGCCCA ACGGCCCGCC GGTGCCGTAT CCGGTGCAGT TTCGTGTGGT GGGCACGGAC CCGCTGCTGC TGCGCGAGCG TGCCGACGAG GTCAACGCCA TCCTGCGTTT GAACCCGAAC ATGCGCGGTG TCAATGACAA CTGGAACGAG TCGGTCAAGG TGATGCGCCT GGAGGTGGAC CAGACCAAGG CCCGCGCGCT GGGCGTGAGC AGCCAGTCCA TTGCCCAGGC GTCCAGAGCC ATCTTTAGCG GTGCCACGGT CGGCCAGTTC CGTGAAGGTG ACCAATTGAT CGACATCGTG CTGCGCCAAC CGCTGGCTGA GCGCAACGCC ATCAGCGATA TCGCCAATGC GTATGTGCCG ACGGCCTCCG GCAAATCGAT TCCGCTGACG CAGATCGCCA AGCCGGTGTT TGCCTGGGAG CCGGGCGTGA TGTGGCGTGA GAACCGCGAC TACGCCATCA CCGTACAGGG CGACATTGTT GAAGGACTAC AGGGCGCCAC GGTGACGGCT CAATTGCTGC CGCAACTCAA AAAGCTGGAA ACGCAATGGG CGCAGAGCGG CCACAGTGGC TACCGCATCG AAGTCGCCGG TGCGGTGGAG GAGAGCAGCA AGGGGTCGGC CTCGATCATC GTTGGCATTC CCATCATGCT GTTCATCACT TTCACACTGC TGATGCTGCA GCTGCACAGC TTCAGCCGCG CGATGCTGGT GTTCCTGACC GGGCCGCTGG GTATTGCGGG CGTGGCGGCG GCGCTGCTGC TGCTGAACCG GCCCTTTGGC TTTGTGGCGC TGCTGGGGGT GATCGCGCTG ATGGGCATGA TTCAACGCAA CTCGGTGATT CTGATCGACC AGATTGAGCA GGACCGCGCC CGCGGCGTGC CGGATTGGGA GGCGATTGTG GAGTCGACAG TGCGCCGCCT GCGCCCGATT GTGCTGACCG CAGCGGCGGC CGTGCTGGCC ATGATTCCCC TGTCGCGCTC GGTTTTCTGG GGCCCGATGG CGGTGGCGAT CATGGGCGGA CTGGTTGTGG CCACGGTTTT GACCTTGCTG GCCTTGCCAG CCATGTATGC GGCCTGGTTC CGGGTCAGGC GGGAACCGAA CGCGGCAAGT TAG
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Protein sequence | MKHHQSKKSF NLSRWALEHA ALTRFLMLVL LLLGVSAYFQ LGQDEDPPFT FRAMVVRSYW PGATAQQVAE QVTDKIERTL QEVPYADKIR SYSKPGESQI IFQIKDSSKA SEVANVWYSV RKKVGDMRGT LPQGVLGPFF NDDFGDVFGV IYALQADGFS YAELKTFADD ARQQLLRVPD VAKVELFGVQ DEKLYIEISQ RRLAELGLDM NAVLAQLGQQ NVVESAGAVQ TPLDVVQLRV AGQFNATDDL RAMPLRGSSG AQLRLGDIAS IERGYVDPPV IKVRHQGQEV IALGVAMTKG GDIIALGKAL KTTTQRLEKA LPVGVKLVQI QDQPTAVATS VREFVKVLIE AVTIVLVVSF VSLGLHKRPG QNSLLKRWTL DMRPGLVVGI TIPLVLAMTF LAMQYWGIGL HKISLGSLII ALGLLVDDAI ISVEMMVTKM EQGYDKVRAA TFAYEITAMP MLTGTLITAA GFLPIGLAQS TVGEYTFAIF AVTVIALVLS WIVSVYFVPY LGTLLLKAPP HVVLANRAGA DEPSAGPVHD PYDTPFYNAF RRAVNACVQH RWLTLGATLL VFALGIVGMG RVQQQFFPDS SRPEIIVDIW SPEGSSFAAN EAVAKRVEAR LLAEPGVASV TQWVGSGVPR FYLPLDQVFP QTNVSQFIVV PADLKLRESL RVKLPALLAT EFPEVRGRVK LLPNGPPVPY PVQFRVVGTD PLLLRERADE VNAILRLNPN MRGVNDNWNE SVKVMRLEVD QTKARALGVS SQSIAQASRA IFSGATVGQF REGDQLIDIV LRQPLAERNA ISDIANAYVP TASGKSIPLT QIAKPVFAWE PGVMWRENRD YAITVQGDIV EGLQGATVTA QLLPQLKKLE TQWAQSGHSG YRIEVAGAVE ESSKGSASII VGIPIMLFIT FTLLMLQLHS FSRAMLVFLT GPLGIAGVAA ALLLLNRPFG FVALLGVIAL MGMIQRNSVI LIDQIEQDRA RGVPDWEAIV ESTVRRLRPI VLTAAAAVLA MIPLSRSVFW GPMAVAIMGG LVVATVLTLL ALPAMYAAWF RVRREPNAAS
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