Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1500 |
Symbol | |
ID | 3961115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 1613494 |
End bp | 1614576 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637916320 |
Product | respiratory-chain NADH dehydrogenase, subunit 1 |
Protein accession | YP_522764 |
Protein GI | 89900293 |
COG category | [C] Energy production and conversion |
COG ID | [COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.407622 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGACA CCATTTTCGC TTTGGGTGAG GGTCTGCTGG CTGCGCCCTG GTGGTCGGCG ATTGGCTGGC CAGTCGTCTG GGCCCTGATT AAGGTTACGC TGGTTCTGAT GATTGTGATG GGCGCAGTGA CCTACACGAC ACTGTGGGAA CGCAGGCTAC TGGCCTGGGC TCAGATCCGC ATGGGTCCAA ACCGCGTGGG GCCTTGGGGT CTGCTGCAAC CCATAGCGGA TGCGATGAAG TTGATGACCA AAGAGGTGCT TAGACCTGCC GCCGCAGAAA AATTCTTGTT TTATCTCGGC CCGGTCATGA CGGTGATGCC GGCCATGGCG GCGTGGGCCG TGATTCCGTT TGGTCCAGAC ATTGCTTTGG CGAACATCAA TGCGGGCTTG CTGTTTCTGA TGGCCATCAC CTCCATGGAG GTGTATGGCG TGATCATCTC CGGGTGGTCA TCCAATTCCA AATATCCATT TCTGGGCGCC TTGCGTGCAT CCTCCCAGAT GGTGAGCTAC GAGATTGCAA TGGGCTTTTG CCTGGTAGTG GTGCTCATGG TTTCTGCAAG TCTGAATCTG ACAGATATTG TCGCGGGGCA AAACAAGGGC TACTTCGCGC AAATCGGTCT TAATTTCCTG TCCTGGAATT GGTTGCCGCT GTTGCCGATT TTCTTGATCT ATTTTATTTC TGGCTTGGCG GAAACAAATC GACTTCCTTT TGACGTAATT GAAGGCGAGT CGGAAATTGT GGCGGGCCAT ATGGTCGAAT ACTCTGGCAT GTCTTGGGCC ATGTTTCAGA TGGCAGAGTA CGCCAACATA TGGCTGGTTT CGGTCTTGAC GACGATCATG TTTCTCGGTG GATGGCTATC GCCGATCGAT AGTGTTATGT TCAACTGGAT TCCAGGTTGG ATATGGCTGG GACTTAAATC GTTTTGCGTG GTGACAATGT TTATCTGGGT ACGGGTTTCG TTTCCGCGAT TTCGTTACGA CCAAATTATG CGGTTGGGCT GGAAAATATT TATTCCAGTC AGCCTTATTT GGTTGGTGGT TGTTGGGGGA TGGATGCAGA CCCCGTGGAA CATTTGGAAG TAA
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Protein sequence | MIDTIFALGE GLLAAPWWSA IGWPVVWALI KVTLVLMIVM GAVTYTTLWE RRLLAWAQIR MGPNRVGPWG LLQPIADAMK LMTKEVLRPA AAEKFLFYLG PVMTVMPAMA AWAVIPFGPD IALANINAGL LFLMAITSME VYGVIISGWS SNSKYPFLGA LRASSQMVSY EIAMGFCLVV VLMVSASLNL TDIVAGQNKG YFAQIGLNFL SWNWLPLLPI FLIYFISGLA ETNRLPFDVI EGESEIVAGH MVEYSGMSWA MFQMAEYANI WLVSVLTTIM FLGGWLSPID SVMFNWIPGW IWLGLKSFCV VTMFIWVRVS FPRFRYDQIM RLGWKIFIPV SLIWLVVVGG WMQTPWNIWK
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