Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1491 |
Symbol | tpiA |
ID | 3960932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 1605357 |
End bp | 1606100 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637916310 |
Product | triosephosphate isomerase |
Protein accession | YP_522755 |
Protein GI | 89900284 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0149] Triosephosphate isomerase |
TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.020715 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAAA AGCTGATCGC AGGCAACTGG AAAATGAACG GCAGTCTGGC TGCCAATGAG GCCCTTGTGA AAGGTCTTCG AGTTGGGGTG GGCGCGTCAG TCTGTCAGGT CGCGTTGTGT GTGCCGTCGG TCTATCTGGC GCAATGCCAG GCGCTGCTTG TTGGCACTGC CATTGCTCTG GGTGCGCAGG ATCTTTCCCA GCATGAGGTG GGCGCCTTCA CGGGTGAAAT TTCTGGGGCC ATGCTTCAGG AATTTGGTGT ACGTTATTGC ATCGTTGGTC ATTCCGAGCG TCGTCAATAT CACTTTGAGA CGGATGCCCT CGTTGCAGCC AAAGCGCAGC GGGCTCTGGC CTGTGGCATC ACGCCGATTG TGTGTGTCGG CGAGACCCTG GCTGAGCGCG AAGCTGGCAG GACCGAAGAA GTCGTCAAGC GTCAACTGGC GGCGGTGATT CACGCCAATG GTCACTGCAT CAGCGAGGTT GTAGTGGCCT ACGAGCCGGT GTGGGCCATC GGAACGGGCA AGACAGCCAG CATCGAGCAA GCGCAGCAAG TGCACTCGGT GCTGCGCCAA CAGTTGCAGG CCGCTTCAAT CCAGGCGGAT CGTATTCAGA TAATTTACGG CGGCAGCATG AATGCTGCGA ACGCCGCGGA GTTGCTGGCT CAGCCAGATA TCGATGGTGG CCTGGTGGGT GGTGCCTCGC TCAAGGTCCC GGATTTTTTA TCAATTATTG CTTCTGCTTG CTGA
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Protein sequence | MRKKLIAGNW KMNGSLAANE ALVKGLRVGV GASVCQVALC VPSVYLAQCQ ALLVGTAIAL GAQDLSQHEV GAFTGEISGA MLQEFGVRYC IVGHSERRQY HFETDALVAA KAQRALACGI TPIVCVGETL AEREAGRTEE VVKRQLAAVI HANGHCISEV VVAYEPVWAI GTGKTASIEQ AQQVHSVLRQ QLQAASIQAD RIQIIYGGSM NAANAAELLA QPDIDGGLVG GASLKVPDFL SIIASAC
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