Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1486 |
Symbol | |
ID | 3960927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 1599455 |
End bp | 1600099 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637916305 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_522750 |
Protein GI | 89900279 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4566] Response regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.108748 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCAAC CCGCTATTCA CATAGTTGAC GATGACCCGG ACATTCGGGA TGGACTGGCC TGGCTGTTCG ACTCGCGCGG CTACGTGGCA GCCACGTGGG ACGGCGGCCC GGCGTTTTTG GACGCGGCGA AGGCGATGCT GGGTCATTGG GGTCATGCGG TGGTGTTGCT CGATGTCCGC ATGACGCCCT TGTCCGGGTT GGTCACGTTT GAGCGGCTCA AGGCGCTGTG TTGCCCCTGG CCCGTGTTGT TTTTGACCGG CAACGGCGAC GTTGGCATGG CGGTGGCGGC CGTCAAGAGC GGTGCCTGGG ATTTTCTGGA AAAGCCGTTT CAGGACAATG AGTTGGTCGA CCGGGTGGAG CAAGCGCTGG CGGCGGCGTC AGCGATCAGT GACACCGATC TGGAGGTGTA TCGCCTCAAG CAGGCGCTGA CCAGTCTGAG TCCGCGTGAG CGTGAAGTTC TGGATGAACT GATTCGCGGT CACTACAACA AGACCATTGC GGACCATCTC GGCATTACCC CACGCACCGT CGAGTTCCAC CGATCGCATA TTTTTGAAAA AATGGGCGTC AGTTCGGCGG TTGAGCTGGC CCACAAGCTC GGGCGCCTGC AGCCGTTGTC GATCATCCAG CCGCCGCAGA CTTGA
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Protein sequence | MNQPAIHIVD DDPDIRDGLA WLFDSRGYVA ATWDGGPAFL DAAKAMLGHW GHAVVLLDVR MTPLSGLVTF ERLKALCCPW PVLFLTGNGD VGMAVAAVKS GAWDFLEKPF QDNELVDRVE QALAAASAIS DTDLEVYRLK QALTSLSPRE REVLDELIRG HYNKTIADHL GITPRTVEFH RSHIFEKMGV SSAVELAHKL GRLQPLSIIQ PPQT
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