Gene Rfer_1411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1411 
Symbol 
ID3962329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1519376 
End bp1520653 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content60% 
IMG OID637916227 
ProductSte24 endopeptidase 
Protein accessionYP_522675 
Protein GI89900204 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGATC CGTTTCCTTC TCTTTCCCTT TCATTGGTGT TGACCTTCGC TTTTGCGCTG 
GCGTTGCTCG CCGGTCTGGT GTTGAACTTC TGGCTCAGCT CCCGGCAGAT CCGGCATGTG
GCACAACACC GTGGGCAGGT GCCGCCGGCC TTCGCCCAGA CCATCCTGCT TTCCGCGCAC
CAGAAAGCGG CCGACTACAC CATCACCAAG GCACGTTTTG GTTTGCTGGA GCTGACGCTG
GGTGCCGCCG TTCTTTTGGG TTGGACCTTG CTGGGCGGGC TGTCAAGCCT CAACCAGGCG
CTGCTCGGGT GGCTGGGCGG CGGCATGGGG CAGCAAATTG CGCTGCTCGC GGCGTTCGTG
CTGATCAGCG GCCTGATCGA TTTGCCCGTG ACCCTGTACC GGACCTTCGT GATCGAGGAG
CGCTTCGGCT TCAACAAGAT GACGCCCAAG CTCTGGCTGC TGGACTTGCT CAAATCAAGC
CTGATCGGTG CCGTCGTTGG CCTGCCGATT GCCGCACTGA TTTTGTGGAT GATGGGCGCG
ACGGGACACT GGTGGTGGCT GTGGGCCTGG GGCGTGTGGA TGGGTTTCAA TTTGCTCCTG
CTGTTGATCT ACCCGACCTT CATTGCGCCG CTGTTCAACA AGTTTGCGCC ACTGGAGGAT
GAAACACTCA AGACCCGCGT GACGGCGCTG ATGAAACGTT GCGGCTTTGC CGCCAAGGGC
TTGTTTGTGA TGGATGGCTC TAAACGCAGC GCCCACGCCA ACGCCTACTT CACCGGCTTT
GGCGCATCCA AGCGGGTGGT GTTTTATGAC ACCCTGCTGG CCAAACTGTC TGCCGGTGAA
GTGGACGCCG TGCTGGCGCA CGAACTGGGC CACTTCAAGC ACAAACACAT CATCAAGCGC
ATCGTGTCCA TGTTTGCCCT CAGCCTGGTG GGCTTTGCCC TGCTGGGCTG GCTGGCAACG
CAGGCCTGGT TTTATGCCGG GCTGGGGGTT CAGCCCAACC TGGGTGCGCC CAATGACGCA
CTGGCGCTGT TGTTGTTCAT GCTGGCGTTG CCGGTTTTCA GCTTCTTCAT CGCGCCTGTT
ATGGCCCACT TCTCACGCAA GCACGAGTTT GAGGCCGATG CCTATGCCGT ACGCCAGACC
AGCGGCCCGG ACCTTGCCAC AGCGCTGCTC AAGCTGTATG AAGACAACGC GTCGACGCTG
ACACCGGATC CGCTGTATGT GAAGTTCCAC TACTCGCATC CGCCGGCGTC CGAGCGTCTG
GCGCGGATAA CAGCCTGA
 
Protein sequence
MADPFPSLSL SLVLTFAFAL ALLAGLVLNF WLSSRQIRHV AQHRGQVPPA FAQTILLSAH 
QKAADYTITK ARFGLLELTL GAAVLLGWTL LGGLSSLNQA LLGWLGGGMG QQIALLAAFV
LISGLIDLPV TLYRTFVIEE RFGFNKMTPK LWLLDLLKSS LIGAVVGLPI AALILWMMGA
TGHWWWLWAW GVWMGFNLLL LLIYPTFIAP LFNKFAPLED ETLKTRVTAL MKRCGFAAKG
LFVMDGSKRS AHANAYFTGF GASKRVVFYD TLLAKLSAGE VDAVLAHELG HFKHKHIIKR
IVSMFALSLV GFALLGWLAT QAWFYAGLGV QPNLGAPNDA LALLLFMLAL PVFSFFIAPV
MAHFSRKHEF EADAYAVRQT SGPDLATALL KLYEDNASTL TPDPLYVKFH YSHPPASERL
ARITA