| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1398 |
|---|
| Symbol | |
|---|
| ID | 3962316 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 1510206 |
|---|
| End bp | 1510853 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637916214 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_522662 |
|---|
| Protein GI | 89900191 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1392] Phosphate transport regulator (distant homolog of PhoU) |
|---|
| TIGRFAM ID | [TIGR00153] conserved hypothetical protein TIGR00153 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTTTG CCAAGTTATT GCCTCGTGAA GGCAATTTTT TTGAAATGTT TAACCAGCAT
GCTGACCGAA TCGTGGAGGC GGCCCACGCG TTTTCCAAAC TGGTGGCCAA TTACAGTGAC
CCGCACTTGC GCCAGAAATT CAATCAGGAC GTTGATATCG CTGAACGCGC GGCCGACCGC
GTCACGCACG AAGTCAACAA AGGCATTCAC AAGACATTCA TCACGCCGAT TGATCGCGAG
CAAATTCATT GTTTGATCAA CACCATGGAC GATATCGCCG ACCTGATCCA GGACTCGGCT
GAAACCATGG CTCTGTACGA CGTGCACCAT ATGACTGACG ATATCGTGCG TCTGACCGAC
GTCAGCGTGA AATGCTGCGA GCGGGTACGC GACGCCGTGA AACTATTGGC CAGGATTGCC
GACCCGGCAA CAGCGGAGGC AGCCCTGAAG ACCTGCGAAG AGATCGACCA GTTGGAGTCG
GACGCCGACC GCATCATGCG CAGTGCCATG AGCAAACTCT TTCGGGAAGA GCCGGACGTG
CGGGAATTGA TCAAGCTCAA GGCGATCTAT GAATTGCTGG AGACGATCAC CGACAAATGC
GAAGACGTTG CCAACGTCAT CGAGGGCATC GTCCTCGAGA ATTCCTGA
|
|---|
| Protein sequence | MLFAKLLPRE GNFFEMFNQH ADRIVEAAHA FSKLVANYSD PHLRQKFNQD VDIAERAADR
VTHEVNKGIH KTFITPIDRE QIHCLINTMD DIADLIQDSA ETMALYDVHH MTDDIVRLTD
VSVKCCERVR DAVKLLARIA DPATAEAALK TCEEIDQLES DADRIMRSAM SKLFREEPDV
RELIKLKAIY ELLETITDKC EDVANVIEGI VLENS
|
|---|
| |