Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1374 |
Symbol | |
ID | 3960198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 1480557 |
End bp | 1482836 |
Gene Length | 2280 bp |
Protein Length | 759 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637916191 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_522639 |
Protein GI | 89900168 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.43954 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCGTCG TTGATCAACT GAAAAATTTT TTTGTCAAAA AAGTACCTGA GTCTGATCAA GATTCCCGCT TGAGCCTTGG CGTGCCGGGC GCCACCCTAT ATCCGATGGA GTTGGATCAA ATGACGGGCA CAACAGAATC CGGACAACAA AGACCGGTTG CGCCAGGGCG ATCCAGTGGC GACACGGGTG AGGCGATTGA TGACGAGGCG GCCAACCTGA TTGCCCTTCC GATTTTGGGA AAGAAAACGG TAGTCCAGCA TCAGCGCCTG CTTTCGATAC TGCTGGGTCT GGCCTTGGTT TTGCTCGTAG TTGTGACTTT GTTTGCGTTA AACCAAGCGA ACAAGGTGGC GCAGCAATTA GGGGCCACGG GACAGTCGCT GATGCAGTCA CAGCGTCTGG CGAAGTCGGT TTCTCAGGCG TTGGTGGGTG GTGCAGAGGC ATTCCCCGAC GTGGTGGAGA GCTCGGGCGT TTTGGCCAAG TCAGTCCGCG GTCTGAAAGC CGGTGATGGG CAAATGGGAT TGAGTGCCTT GAGTCCAGAT TATTTGCCCG AGCTTGACAA GATCACGCCG CTGATGGAGA GGGCAGAAAA GAATGCGGCG ATTGTGTTGG GCCAACAAAA AATATTGACG CAGGTCGGTG CCGCGCTTCG GCTGATCAAC CGGCAATCGT CGGATTTACT GGAAATAGCA GAGACGGCGT CCTCCCTCAA GCTGCAACAA AACGCCGCCG CCGCAGAGAT ATCGGCGGCC GGTCAGTTGG TGATGTTGAC ACAGCGTATT GGCAAGTCTT CAAATGAGTT CCTGACGGTT GAGGGCGTGA GTCCGGAGGC GGTTTTTCTG TTGGGCAAGG ACTTGAACTC GTTCAAGGAA ATCGCCCAAG GCATGCTTGA TGGCAGTCCC GAGTTGCGTT TGGGTGCGAC GAAAGACCCG CAAACACGTG AGCAGTTGGC TGCCTTGATC AATCTTTTTG AGGAGACCCG AAAGCAGGCG GGGGCCATTT TGGGTAATCT GCAGGGGCTT GTTTCGGCCC GTGAAGCACA GGTTTCCATT ATTGCGGACA GTGAACCTCT GCGTCGAAAT CTTGAAGAGC TGCAGGGCAA ACTGTCAGCA CACGCAGGTC TCGGTGCTGG CGCTTTGTCG ATGCTGGTGG GTTCTGTTTT GCTGGCGCTG CTTTGTGCTG GTGGCTTGTC CTATGTTCAA TTGCTTGACA GCCGCAAGCG TCAGGTCGCG GCCGAAGCGC AGCGCCTGGA GGCCGAGCGT CAGGAGAAGG AGGCCAAACG TGTGAACGAT GCGAACCAGG CTGCCATTTT GCGTTTGATG AACGAGTTGC AAACTGTCGC CGAAGGCGAT TTGACGCAAG AGGCGACTGT GACAGAGGAC ATCACGGGGG CCATCGCCGA TTCGGTCAAT TACACGGTGG AGGAGTTGCG ATCGCTGGTG GGTAACGTGC AAAGTACGGT CACCCGTGTG GCGCAGACGA CCGCTGAAGT GGACACGACG TCAACAGAGT TGTTGGCAGC CTCCAATGAA CAGTTGCATG AAATTCGGGA AACCGGCCGC TCGGTCGTGG ATATGGCGTC ACGAATCAAT GACGTCTCCG TGCAGGCACA GGAATCTGCC TCGGTTGCCA GGCAGTCTCT GCAGGCTGCG GAGGTGGGTT TGAAGGCGGT GCAAAACACC ATTGGCGGCA TGAACTCGAT TCGGGACCAG ATACAGGAGA CATCCAAGCG CATCAAGCGC CTGGGCGAGT CGTCGCAGGA AATTGGTGAA ATCACGGAAC TGATTTCCGA CATTACCGAA CAGACCAACG TGTTGGCGCT CAATGCCGCC ATTCAGGCCG CGTCGGCCGG TGAAGCCGGG CGGGGCTTCT CGGTGGTGGC CGAGGAGGTA CAGCGGCTTG CCGAACGATC AGCCGACGCG ACGCGTCAAA TTTCGGCACT GGTCAAAGCG ATTCAAACCG ACACGCAGGA TGCGGTGGGT GCCATGGAGC GGTCAACCCA AGGGGTGGTG GAAGGCGCCA AGCTTTCGGA CAACGCCGGT ACTGCGTTGA CTGAAATTGA CCAGGTGTCC CGGCGCCTGG CGGAGCTGAT CGAACAAATT TCCAGTTCAA CCTCCCGCGA GGCGAACCTG GCCAACGTGG TGGCTGACAA TATCCAGCAC ATTTTTGCGG TTACCGAACA GACGGGTGAG GGGACTCGTT CCACGGCAGC CCAGGTCCGC GAGCTCTCGA AAATGGCTGA AGAGTTGCGG CAGTCAGTGT CACGGTTCAA GATTGCCTGA
|
Protein sequence | MSVVDQLKNF FVKKVPESDQ DSRLSLGVPG ATLYPMELDQ MTGTTESGQQ RPVAPGRSSG DTGEAIDDEA ANLIALPILG KKTVVQHQRL LSILLGLALV LLVVVTLFAL NQANKVAQQL GATGQSLMQS QRLAKSVSQA LVGGAEAFPD VVESSGVLAK SVRGLKAGDG QMGLSALSPD YLPELDKITP LMERAEKNAA IVLGQQKILT QVGAALRLIN RQSSDLLEIA ETASSLKLQQ NAAAAEISAA GQLVMLTQRI GKSSNEFLTV EGVSPEAVFL LGKDLNSFKE IAQGMLDGSP ELRLGATKDP QTREQLAALI NLFEETRKQA GAILGNLQGL VSAREAQVSI IADSEPLRRN LEELQGKLSA HAGLGAGALS MLVGSVLLAL LCAGGLSYVQ LLDSRKRQVA AEAQRLEAER QEKEAKRVND ANQAAILRLM NELQTVAEGD LTQEATVTED ITGAIADSVN YTVEELRSLV GNVQSTVTRV AQTTAEVDTT STELLAASNE QLHEIRETGR SVVDMASRIN DVSVQAQESA SVARQSLQAA EVGLKAVQNT IGGMNSIRDQ IQETSKRIKR LGESSQEIGE ITELISDITE QTNVLALNAA IQAASAGEAG RGFSVVAEEV QRLAERSADA TRQISALVKA IQTDTQDAVG AMERSTQGVV EGAKLSDNAG TALTEIDQVS RRLAELIEQI SSSTSREANL ANVVADNIQH IFAVTEQTGE GTRSTAAQVR ELSKMAEELR QSVSRFKIA
|
| |