Gene Rfer_1374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1374 
Symbol 
ID3960198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1480557 
End bp1482836 
Gene Length2280 bp 
Protein Length759 aa 
Translation table11 
GC content57% 
IMG OID637916191 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_522639 
Protein GI89900168 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.43954 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGTCG TTGATCAACT GAAAAATTTT TTTGTCAAAA AAGTACCTGA GTCTGATCAA 
GATTCCCGCT TGAGCCTTGG CGTGCCGGGC GCCACCCTAT ATCCGATGGA GTTGGATCAA
ATGACGGGCA CAACAGAATC CGGACAACAA AGACCGGTTG CGCCAGGGCG ATCCAGTGGC
GACACGGGTG AGGCGATTGA TGACGAGGCG GCCAACCTGA TTGCCCTTCC GATTTTGGGA
AAGAAAACGG TAGTCCAGCA TCAGCGCCTG CTTTCGATAC TGCTGGGTCT GGCCTTGGTT
TTGCTCGTAG TTGTGACTTT GTTTGCGTTA AACCAAGCGA ACAAGGTGGC GCAGCAATTA
GGGGCCACGG GACAGTCGCT GATGCAGTCA CAGCGTCTGG CGAAGTCGGT TTCTCAGGCG
TTGGTGGGTG GTGCAGAGGC ATTCCCCGAC GTGGTGGAGA GCTCGGGCGT TTTGGCCAAG
TCAGTCCGCG GTCTGAAAGC CGGTGATGGG CAAATGGGAT TGAGTGCCTT GAGTCCAGAT
TATTTGCCCG AGCTTGACAA GATCACGCCG CTGATGGAGA GGGCAGAAAA GAATGCGGCG
ATTGTGTTGG GCCAACAAAA AATATTGACG CAGGTCGGTG CCGCGCTTCG GCTGATCAAC
CGGCAATCGT CGGATTTACT GGAAATAGCA GAGACGGCGT CCTCCCTCAA GCTGCAACAA
AACGCCGCCG CCGCAGAGAT ATCGGCGGCC GGTCAGTTGG TGATGTTGAC ACAGCGTATT
GGCAAGTCTT CAAATGAGTT CCTGACGGTT GAGGGCGTGA GTCCGGAGGC GGTTTTTCTG
TTGGGCAAGG ACTTGAACTC GTTCAAGGAA ATCGCCCAAG GCATGCTTGA TGGCAGTCCC
GAGTTGCGTT TGGGTGCGAC GAAAGACCCG CAAACACGTG AGCAGTTGGC TGCCTTGATC
AATCTTTTTG AGGAGACCCG AAAGCAGGCG GGGGCCATTT TGGGTAATCT GCAGGGGCTT
GTTTCGGCCC GTGAAGCACA GGTTTCCATT ATTGCGGACA GTGAACCTCT GCGTCGAAAT
CTTGAAGAGC TGCAGGGCAA ACTGTCAGCA CACGCAGGTC TCGGTGCTGG CGCTTTGTCG
ATGCTGGTGG GTTCTGTTTT GCTGGCGCTG CTTTGTGCTG GTGGCTTGTC CTATGTTCAA
TTGCTTGACA GCCGCAAGCG TCAGGTCGCG GCCGAAGCGC AGCGCCTGGA GGCCGAGCGT
CAGGAGAAGG AGGCCAAACG TGTGAACGAT GCGAACCAGG CTGCCATTTT GCGTTTGATG
AACGAGTTGC AAACTGTCGC CGAAGGCGAT TTGACGCAAG AGGCGACTGT GACAGAGGAC
ATCACGGGGG CCATCGCCGA TTCGGTCAAT TACACGGTGG AGGAGTTGCG ATCGCTGGTG
GGTAACGTGC AAAGTACGGT CACCCGTGTG GCGCAGACGA CCGCTGAAGT GGACACGACG
TCAACAGAGT TGTTGGCAGC CTCCAATGAA CAGTTGCATG AAATTCGGGA AACCGGCCGC
TCGGTCGTGG ATATGGCGTC ACGAATCAAT GACGTCTCCG TGCAGGCACA GGAATCTGCC
TCGGTTGCCA GGCAGTCTCT GCAGGCTGCG GAGGTGGGTT TGAAGGCGGT GCAAAACACC
ATTGGCGGCA TGAACTCGAT TCGGGACCAG ATACAGGAGA CATCCAAGCG CATCAAGCGC
CTGGGCGAGT CGTCGCAGGA AATTGGTGAA ATCACGGAAC TGATTTCCGA CATTACCGAA
CAGACCAACG TGTTGGCGCT CAATGCCGCC ATTCAGGCCG CGTCGGCCGG TGAAGCCGGG
CGGGGCTTCT CGGTGGTGGC CGAGGAGGTA CAGCGGCTTG CCGAACGATC AGCCGACGCG
ACGCGTCAAA TTTCGGCACT GGTCAAAGCG ATTCAAACCG ACACGCAGGA TGCGGTGGGT
GCCATGGAGC GGTCAACCCA AGGGGTGGTG GAAGGCGCCA AGCTTTCGGA CAACGCCGGT
ACTGCGTTGA CTGAAATTGA CCAGGTGTCC CGGCGCCTGG CGGAGCTGAT CGAACAAATT
TCCAGTTCAA CCTCCCGCGA GGCGAACCTG GCCAACGTGG TGGCTGACAA TATCCAGCAC
ATTTTTGCGG TTACCGAACA GACGGGTGAG GGGACTCGTT CCACGGCAGC CCAGGTCCGC
GAGCTCTCGA AAATGGCTGA AGAGTTGCGG CAGTCAGTGT CACGGTTCAA GATTGCCTGA
 
Protein sequence
MSVVDQLKNF FVKKVPESDQ DSRLSLGVPG ATLYPMELDQ MTGTTESGQQ RPVAPGRSSG 
DTGEAIDDEA ANLIALPILG KKTVVQHQRL LSILLGLALV LLVVVTLFAL NQANKVAQQL
GATGQSLMQS QRLAKSVSQA LVGGAEAFPD VVESSGVLAK SVRGLKAGDG QMGLSALSPD
YLPELDKITP LMERAEKNAA IVLGQQKILT QVGAALRLIN RQSSDLLEIA ETASSLKLQQ
NAAAAEISAA GQLVMLTQRI GKSSNEFLTV EGVSPEAVFL LGKDLNSFKE IAQGMLDGSP
ELRLGATKDP QTREQLAALI NLFEETRKQA GAILGNLQGL VSAREAQVSI IADSEPLRRN
LEELQGKLSA HAGLGAGALS MLVGSVLLAL LCAGGLSYVQ LLDSRKRQVA AEAQRLEAER
QEKEAKRVND ANQAAILRLM NELQTVAEGD LTQEATVTED ITGAIADSVN YTVEELRSLV
GNVQSTVTRV AQTTAEVDTT STELLAASNE QLHEIRETGR SVVDMASRIN DVSVQAQESA
SVARQSLQAA EVGLKAVQNT IGGMNSIRDQ IQETSKRIKR LGESSQEIGE ITELISDITE
QTNVLALNAA IQAASAGEAG RGFSVVAEEV QRLAERSADA TRQISALVKA IQTDTQDAVG
AMERSTQGVV EGAKLSDNAG TALTEIDQVS RRLAELIEQI SSSTSREANL ANVVADNIQH
IFAVTEQTGE GTRSTAAQVR ELSKMAEELR QSVSRFKIA