Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1329 |
Symbol | |
ID | 3961360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 1428373 |
End bp | 1429086 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637916144 |
Product | phosphoserine phosphatase SerB |
Protein accession | YP_522594 |
Protein GI | 89900123 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0560] Phosphoserine phosphatase |
TIGRFAM ID | [TIGR00338] phosphoserine phosphatase SerB [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACCCTA CTGCCATCGC CCCCGGGCTG ATCATTCAAG GCTTTGCCCC ACCGCTGCGT TTGAGCGACT TCAAACTGAT CGCCTTCGAC ATGGACTCCA CACTCATCAA CATCGAGTGT GTGGATGAAA TTGCAGACGC GGTCGGGCGC AAGCGAGAAG TCGCCGCCAT CACCGAAGCG GCCATGCGGG GTGAGATCAC CGACTACAAA GAGAGCCTGC GCCAGCGCGT GGCGCTGCTC CAGGGGGTGA CCGAAGTGCA GATGAACCAG ATTTATCAGG AACGGATGCA GTTCAACCCC GGTGCTGCCG AGCTGGTCGC GGCCTGCAAG GCAGCCGGGC TCAAAGTGCT GCTGGTCTCG GGCGGATTCA CCCACTTTAC CGACCGCGTG GCGCAGCGCC TGGGCATTGA CTACACCCGC TCCAATGTGC TGCAGATTGA GAACGGCGTC CTCACCGGCC GCATGGTCGA TCAGCCCTGG GGCGACATTT GTGATGGTGC TGAAAAGCGC AAGATGCTGC TCGAAACCTG CGCCCTGCTG GGTATTGCGC CCAAGCAGGC GATTGCCGTG GGCGACGGCG CCAACGACCT GCCGATGATG CGTGAGGCGG GTTTGTCAGT GGCGTTTCAC GCCAAATCTG CCGTGCGCGA GCTCGCCAAT GTGTCCATCG AGTCAGGCGG GCTGGACCGC CTGCTTGAGC TGTTCCAGCC CTGA
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Protein sequence | MHPTAIAPGL IIQGFAPPLR LSDFKLIAFD MDSTLINIEC VDEIADAVGR KREVAAITEA AMRGEITDYK ESLRQRVALL QGVTEVQMNQ IYQERMQFNP GAAELVAACK AAGLKVLLVS GGFTHFTDRV AQRLGIDYTR SNVLQIENGV LTGRMVDQPW GDICDGAEKR KMLLETCALL GIAPKQAIAV GDGANDLPMM REAGLSVAFH AKSAVRELAN VSIESGGLDR LLELFQP
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