Gene Rfer_1329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1329 
Symbol 
ID3961360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1428373 
End bp1429086 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content62% 
IMG OID637916144 
Productphosphoserine phosphatase SerB 
Protein accessionYP_522594 
Protein GI89900123 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0560] Phosphoserine phosphatase 
TIGRFAM ID[TIGR00338] phosphoserine phosphatase SerB
[TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACCCTA CTGCCATCGC CCCCGGGCTG ATCATTCAAG GCTTTGCCCC ACCGCTGCGT 
TTGAGCGACT TCAAACTGAT CGCCTTCGAC ATGGACTCCA CACTCATCAA CATCGAGTGT
GTGGATGAAA TTGCAGACGC GGTCGGGCGC AAGCGAGAAG TCGCCGCCAT CACCGAAGCG
GCCATGCGGG GTGAGATCAC CGACTACAAA GAGAGCCTGC GCCAGCGCGT GGCGCTGCTC
CAGGGGGTGA CCGAAGTGCA GATGAACCAG ATTTATCAGG AACGGATGCA GTTCAACCCC
GGTGCTGCCG AGCTGGTCGC GGCCTGCAAG GCAGCCGGGC TCAAAGTGCT GCTGGTCTCG
GGCGGATTCA CCCACTTTAC CGACCGCGTG GCGCAGCGCC TGGGCATTGA CTACACCCGC
TCCAATGTGC TGCAGATTGA GAACGGCGTC CTCACCGGCC GCATGGTCGA TCAGCCCTGG
GGCGACATTT GTGATGGTGC TGAAAAGCGC AAGATGCTGC TCGAAACCTG CGCCCTGCTG
GGTATTGCGC CCAAGCAGGC GATTGCCGTG GGCGACGGCG CCAACGACCT GCCGATGATG
CGTGAGGCGG GTTTGTCAGT GGCGTTTCAC GCCAAATCTG CCGTGCGCGA GCTCGCCAAT
GTGTCCATCG AGTCAGGCGG GCTGGACCGC CTGCTTGAGC TGTTCCAGCC CTGA
 
Protein sequence
MHPTAIAPGL IIQGFAPPLR LSDFKLIAFD MDSTLINIEC VDEIADAVGR KREVAAITEA 
AMRGEITDYK ESLRQRVALL QGVTEVQMNQ IYQERMQFNP GAAELVAACK AAGLKVLLVS
GGFTHFTDRV AQRLGIDYTR SNVLQIENGV LTGRMVDQPW GDICDGAEKR KMLLETCALL
GIAPKQAIAV GDGANDLPMM REAGLSVAFH AKSAVRELAN VSIESGGLDR LLELFQP