| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1327 |
|---|
| Symbol | |
|---|
| ID | 3961358 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 1425493 |
|---|
| End bp | 1426770 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637916142 |
|---|
| Product | O-acetylhomoserine/O-acetylserine sulfhydrylase |
|---|
| Protein accession | YP_522592 |
|---|
| Protein GI | 89900121 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2873] O-acetylhomoserine sulfhydrylase |
|---|
| TIGRFAM ID | [TIGR01326] OAH/OAS sulfhydrylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.650765 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCG AAACCCTGGC CGTCCACGGC GGCTACACGC CCGAGCCCAC CACCAAAGCG
GTGGCCGTGC CCATTTACCA AACCGTGGCC TTCGCGTTTG ACGACACCCA GCATGGTGCC
GATTTGTTTG ACCTGAAGGT CGCGGGCAAC ATCTACAGCC GCATCATGAA CCCGACTTGC
GGCGTGTTGG AGGCGCGCGT GGCAGCCATG GAAGGCGGCA TTGGTGCACT GGCAGTGGCC
TCGGGCATGT CGGCGATTGC CTATGCGATT CAGACCATCA CCGAGGCGGG CGACAACATC
GTGTCGGCCT CCACCTTGTA CGGCGGCACC TACAACCTGT TTGCCCACAC CTTCCCGCAA
ATGGGCATCG AGGTGCGCTT TGCCGATTAC CGCGACCCGG CCTCCTTCGC CAAGCTGATC
GACGCGCGCA CCAAGGCGGT CTACTGCGAA ACCATTGGCA ACCCGCTGGG CAACATCACC
GACCTGGCCG CGCTCGCCAC TGTCGCCCAT GCCCACGGCG TGCCCTTGAT TGTGGACAAC
ACGGTCGCCA GCCCGTACCT GTGCCGCCCG TTCGAGATTG GCGCCGACAT CGTGGTGCAT
TCGCTGACCA AATACCTGGG CGGCCACGGC ACCACCATTG GCGGCATCAT TGTGGATTCA
GGCAAGTTCC CGTGGGCCGA GCACAAGGAG CGCTTCAAGC GCCTGAACGA GCCCGATGTG
AGCTACCACG GCGTCGTCTA TACCGAGGCG CTGGGCGCTG CCGCCTACAT TGGCCGCGCC
CGCGTGGTGC CGCTGCGCAA CATGGGCGCC GCTTTGAGCG CGCTGGCTGC CTTCCAGATT
CTGCAGGGCA TCGAAACGCT GGCCTTGCGC ATGGACCGCA TCTGCGACAA CGCCCTGCGC
ATCGCCCAGC ACCTGCAGGC GCACGCCAAG GTGGGCTGGG TCAACTACGC CGGGCTGCCC
GATTCAGCGG ACCACGCGCT GGTTCAAAAG TACCTGGGTG GTCGCGCCTC GGGCATCATC
ACCTTTGGCC TCAAGGCCAG CGACAGCCTG GCGGCCGGTG CGCGCTTTCA GGACGCGCTC
AAACTGTTCA CCCGGCTGGT CAACATTGGC GATGCCAAGT CCTTGGCCTG CCACCCGGCC
AGCACCACGC ACCGCCAACT CAACGCCGAA GAATTGGCCA AAGCGGGCGT GAAACCCGAC
ATGGTGCGTC TGTCAATCGG CATTGAGCAC ATTGACGACC TGCTGGACGA CCTGGACCAG
GCGCTGGCAG CGGTTTGA
|
|---|
| Protein sequence | MKIETLAVHG GYTPEPTTKA VAVPIYQTVA FAFDDTQHGA DLFDLKVAGN IYSRIMNPTC
GVLEARVAAM EGGIGALAVA SGMSAIAYAI QTITEAGDNI VSASTLYGGT YNLFAHTFPQ
MGIEVRFADY RDPASFAKLI DARTKAVYCE TIGNPLGNIT DLAALATVAH AHGVPLIVDN
TVASPYLCRP FEIGADIVVH SLTKYLGGHG TTIGGIIVDS GKFPWAEHKE RFKRLNEPDV
SYHGVVYTEA LGAAAYIGRA RVVPLRNMGA ALSALAAFQI LQGIETLALR MDRICDNALR
IAQHLQAHAK VGWVNYAGLP DSADHALVQK YLGGRASGII TFGLKASDSL AAGARFQDAL
KLFTRLVNIG DAKSLACHPA STTHRQLNAE ELAKAGVKPD MVRLSIGIEH IDDLLDDLDQ
ALAAV
|
|---|
| |