Gene Rfer_1297 details

Gene Information

• Locus tag: Rfer_1297
• Symbol: aspS
• ID: 3962170
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 1391057
• End bp: 1392892
• Gene Length: 1836 bp
• Protein Length: 611 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 637916112
• Product: aspartyl-tRNA synthetase
• Protein accession: YP_522562
• Protein GI: 89900091
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0173] Aspartyl-tRNA synthetase
• TIGRFAM ID: [TIGR00459] aspartyl-tRNA synthetase, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.474496
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCATGC GCTCTCATTA TTGCGGTCTT GTCACCGACA CCCTGTTGGG TCAAACCGTC 
ACCCTGTGTG GTTGGGTTAA TCGTCGCCGC GACCACGGGG GCGTGATTTT TGTCGATATC 
CGGGATCGCG AAGGTTACGT GCAGGTGGTG TGTGACCCGG ACCGTGCCGA CATGTTCAAG 
GTGGCCGAGG GTCTTCGCAA CGAGTTTTGT ATTCAGGTCA AAGGCCTGGT GCGTGCCCGC 
CCTGAAGGCA CGGTCAATGA AGGCCTCAAG AGCGGCAAGA TCGAGGTGCT TTGCCATGAG 
CTGACGGTAC TCAACCCGTC GGTCACGCCC CCGTTTCAGC TCGATGATGA CAACCTGAGC 
GAGACCACGC GCCTGACGCA CCGGGTGCTG GACTTGCGTC GCCCCTATAT GCAAAACAAT 
TTGATGTTGC GCTACCGCGT GGCCATGGAG GTGCGCAAGT TTCTCGATGC CAACGGTTTT 
GTTGACATTG AAACCCCGAT GCTCGGCAAG TCCACCCCAG AGGGTGCGCG CGACTATCTG 
GTGCCCAGCC GAGTCCATGA GGGCCACTTT TTTGCCTTGC CGCAGAGCCC GCAGTTGTTC 
AAGCAATTGT TGATGGTGGC GGGTTTCGAT CGTTATTACC AGATCACCAA GTGCTTTCGT 
GATGAGGACT TGCGTGCTGA CCGCCAGCCC GAATTCACAC AAATTGATAT TGAGACCTCG 
TTTCTGAGTG AACAGGATAT TCGTGACCTG TTCCAGGAAA TGATCACGAC CGTTTTCAAG 
ACCACCTTGA ATGTTGACTT GGGCGAATTC CCGGTGATGG CGTATTCCGA GGCCATGCAT 
CGTTATGGCT CGGACAAGCC CGACCTGCGC GTCAAGCTCG AATTCACCGA GCTGACCGAT 
GTGATGACCG ACGTGGACTT CAAGGTGTTC TCGGGTGCCG CGACCATGAA GGGCGGTCGT 
GTGGTGGGCC TGCGCATTCC GGGCGGCGCG CGTGAAGTCG GCGGCTTGAG CCGTGGCGAG 
ATTGATGCCT ACGCTGAGTT TGTCAAAATC TACGGGGCCA AAGGGCTGGC GTACATCAAG 
GTCAACGAGT TGGCCAAGGG CCCGGGCGAC AAGGCCCTTC GGTGGCCGGG CCTGCAGTCG 
CCCATCGTCA AGAATATTCA CGACAAAGCC ATTGCCGAAG TGCTGGCCCG CACCGGTGCG 
CAAGATGGAG ACCTGATTTT CTTTGGCGCT GACAAAGCCA AGATTGTCAA CGACGCCATC 
GGCGCTTTGC GCATCAAGAT TGGTCACAGC GAGTTTGGCA AGAAGAATGC TTTGTTCGAG 
AAGTCCTGGC GCCCGATGTG GGTGGTTGAC TTTCCGATGT TTGAGTTTGA TGAAGAGGCG 
CAGCGCTACA CCGCAGTGCA TCACCCCTTC ACGGCGCCCA AGGAAGGGCA TGAAGACTGG 
ATGGTCACAG CCCCCGAGAA GTGCATCTCG CAGGGTTATG ACATGGTGCT CAACGGCTGG 
GAGATGGGCG GCGGCTCGGT GCGTATCCAC CGCGCCGATG TGCAGCAAAA AGTGTTTGAT 
GCCTTGAAAA TCTCGCCGGA AGAAGCGCAA GACAAATTTG GTTTCTTGCT GGATGCCTTG 
CAATATGGTG CGCCACCGCA TGGCGGCCTG GCTTTTGGTC TGGACCGCAT CATTACGTTG 
ATGACCGGTG CCGAGTCAAT TCGCGACGTC ATCGCCTTCC CCAAAACCCA GCGTGCGCAG 
TGTCTGCTGA CGCAAGCGCC GTCACCGGTG GACGAGAAAC AGTTGCGCGA ACTGCACATC 
CGGCTGCGCA CGCCTGAGCC CATAAAAGCG GCTTGA 

 

Protein sequence

MAMRSHYCGL VTDTLLGQTV TLCGWVNRRR DHGGVIFVDI RDREGYVQVV CDPDRADMFK 
VAEGLRNEFC IQVKGLVRAR PEGTVNEGLK SGKIEVLCHE LTVLNPSVTP PFQLDDDNLS 
ETTRLTHRVL DLRRPYMQNN LMLRYRVAME VRKFLDANGF VDIETPMLGK STPEGARDYL 
VPSRVHEGHF FALPQSPQLF KQLLMVAGFD RYYQITKCFR DEDLRADRQP EFTQIDIETS 
FLSEQDIRDL FQEMITTVFK TTLNVDLGEF PVMAYSEAMH RYGSDKPDLR VKLEFTELTD 
VMTDVDFKVF SGAATMKGGR VVGLRIPGGA REVGGLSRGE IDAYAEFVKI YGAKGLAYIK 
VNELAKGPGD KALRWPGLQS PIVKNIHDKA IAEVLARTGA QDGDLIFFGA DKAKIVNDAI 
GALRIKIGHS EFGKKNALFE KSWRPMWVVD FPMFEFDEEA QRYTAVHHPF TAPKEGHEDW 
MVTAPEKCIS QGYDMVLNGW EMGGGSVRIH RADVQQKVFD ALKISPEEAQ DKFGFLLDAL 
QYGAPPHGGL AFGLDRIITL MTGAESIRDV IAFPKTQRAQ CLLTQAPSPV DEKQLRELHI 
RLRTPEPIKA A