| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1294 |
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| Symbol | ubiB |
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| ID | 3962167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1388349 |
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| End bp | 1389914 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637916109 |
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| Product | putative ubiquinone biosynthesis protein UbiB |
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| Protein accession | YP_522559 |
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| Protein GI | 89900088 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0661] Predicted unusual protein kinase |
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| TIGRFAM ID | [TIGR01982] 2-polyprenylphenol 6-hydroxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0881794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCGTC TGTTTCGTGG CGTCTTCATC GTCTGGATGA TGTTGCGCTA TGGTCTCGAT
GAGCTGTTTC TGACCAGCTT TCGCAAGCCC TGGCTGCATG CCTTGGCCCG CATCGTGTCG
ATCGGGCGAA ATCTCGACGC ACCCCGGGGG CAACGGATTC GCGAGGCGCT GGAGAGCCTG
GGCCCGATTT TTGTGAAGTT TGGGCAGGTG CTGTCGACGC GGCGCGACTT GTTGCCGCTC
GATATTGCCG ATGAGCTGGC CCGCTTGCAG GATCGGGTGC CACCGTTTGA CAGCGATGTG
GCCATTGCCT CCATTGAGCG GGCGTTCAAT AAAAAAGTCG GCGACATTTT TGTCTCGTTT
GAGCGGGTGC CGGTTGCCAG TGCCTCGATT GCCCAGGTCC ATTTTGCTGT GCTCAAGGAC
CGGGACGGTC GCGAACGCGA GGTGGCGGTC AAGGTGTTGC GCCCCGGCAT GATGCTGGCG
ATTGAAAAAG ACCTGAGCCT GATGCGCATG ATGGCGGGCT GGGTCGACAG CCTCTCCAAC
GGTGGCAAGC GTCTCAAGCC GCGCGAAGTG GTGGCTGAGT TTGACAAGTA CCTGCATGAC
GAACTTGATC TGATCCGCGA GGCGTCCAGT GCCGCGCAGT TGCGCCGCAA TATGTCAGGG
CTCAATCTGG TACTGATTCC CGAGATGTTC TGGGACTATT GCACGACCGA TGTCATTGTG
ATGGAGCGTA TGCATGGGGT GCCGGTCAGC CAGGTGGATC GCCTGAAGGC CGCGGGGGTT
GATATCCCGA AGCTGGCGCG TGACGGGGTG ACGATTTTCT TCACGCAGGT GTTTCGTGAC
GGCTTTTTTC ATGCCGACAT GCACCCCGGC AACATCCAGG TCAGTATTGA TCCGGCCACC
TTTGGCCGCT ATATCTCGCT CGATTTCGGC ATTGTGGGCA CTTTGACGGC GTCTGATAAA
GAGTACCTGG CGCAAAATTT CACCGCCTTT TTCCGGCGCG ACTACAAGCG GGTCGCCGAG
TTGCACATCG AGTCCGGCTG GGTGCCGCCT GCAACCCGGG TCGATGAGCT GGAGTCGGCC
ATCCGCTCGG TGTGCGAGCC GTACTTTGAT CGGCCGTTGA AGGATTTCTC GCTGGGCATT
GTGTTGATGC GCCTGTTCCA GACCTCGCGG CGTTTTCATG TCGAAATCCA GCCGCAGCTG
GTGTTGCTGC AAAAGACGCT GCTCAACATC GAAGGCCTGG GTCGCCAACT GGACCCTGAT
CTGGATCTCT GGAGCACGGC CAAACCGTTT CTTGAGAAAT GGATGATTGA CCAACTGGGG
CCGAAAATGC TCATGGACCA GTTGCGCAAC GAAGCCCCGC TCTATGCCAA GCTGATCCCT
GAACTCCCGC GCCTGCTGGT CGATTTTCTG AAACATGGAA AGTCGGGCCA GAATGGCGGA
CTCGAAGCCT TGCTGGTGGA GCAAAAACGC ACCAACCGTT TGTTGCAGGC GCTCCTTTAT
GGGGTTCTGG GATTTGTGCT CGGCTTGCTG GTCATGCAGG TGATTGTGCG GGTACGGGTT
TTTTAG
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| Protein sequence | MTRLFRGVFI VWMMLRYGLD ELFLTSFRKP WLHALARIVS IGRNLDAPRG QRIREALESL
GPIFVKFGQV LSTRRDLLPL DIADELARLQ DRVPPFDSDV AIASIERAFN KKVGDIFVSF
ERVPVASASI AQVHFAVLKD RDGREREVAV KVLRPGMMLA IEKDLSLMRM MAGWVDSLSN
GGKRLKPREV VAEFDKYLHD ELDLIREASS AAQLRRNMSG LNLVLIPEMF WDYCTTDVIV
MERMHGVPVS QVDRLKAAGV DIPKLARDGV TIFFTQVFRD GFFHADMHPG NIQVSIDPAT
FGRYISLDFG IVGTLTASDK EYLAQNFTAF FRRDYKRVAE LHIESGWVPP ATRVDELESA
IRSVCEPYFD RPLKDFSLGI VLMRLFQTSR RFHVEIQPQL VLLQKTLLNI EGLGRQLDPD
LDLWSTAKPF LEKWMIDQLG PKMLMDQLRN EAPLYAKLIP ELPRLLVDFL KHGKSGQNGG
LEALLVEQKR TNRLLQALLY GVLGFVLGLL VMQVIVRVRV F
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