Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1263 |
Symbol | |
ID | 3960620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 1357372 |
End bp | 1357932 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637916077 |
Product | sugar transferase |
Protein accession | YP_522528 |
Protein GI | 89900057 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAGAC TATTTGATCT GATCGCGGGC GCTTGCGCTG GGCTGGTCTT GTTGCTGCCG ATTGTGCTGG TCGCCTTGGC GGTGCGCCTG ACTTCAAAAG GGCCAGCCCT GTATTGGTCT GACCGGGTGG GGCGCAACAA CAAGATTTTC AAAATGCCCA AGTTCCGCAG CATGCAGATC GGCACCCCTG CGGTGGCGAC TCATTTGCTG AGCAACCCGG ATGCTTACCT GACACCCATC GGCAGCTTCT TGCGCAAAAG CAGCCTGGAC GAACTGCCAC AGTTGTGGAG CATTCTGGCA GGTGACATGA GTTTTGTCGG GCCACGCCCG GCCCTGTTTA ATCAACACGA CTTGATTGAA TTGCGCACCC AGCAAGGTGT GCATCCGCTG GTGCCTGGCC TGACTGGCTG GGCGCAGGTG AATGGGCGCG ATGAGTTGCC CATTCTGGAC AAGGTGAAGC TCGATGTGGA ATATTTGCAC CACCGGTCGC TCTGGTTTGA CATTCGCATT TTGTGGCTGA CGCTGGTGAA GGTGTTGCGG CGGGATGGGG TGTCGCATTG A
|
Protein sequence | MKRLFDLIAG ACAGLVLLLP IVLVALAVRL TSKGPALYWS DRVGRNNKIF KMPKFRSMQI GTPAVATHLL SNPDAYLTPI GSFLRKSSLD ELPQLWSILA GDMSFVGPRP ALFNQHDLIE LRTQQGVHPL VPGLTGWAQV NGRDELPILD KVKLDVEYLH HRSLWFDIRI LWLTLVKVLR RDGVSH
|
| |