Gene Rfer_1263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1263 
Symbol 
ID3960620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1357372 
End bp1357932 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content57% 
IMG OID637916077 
Productsugar transferase 
Protein accessionYP_522528 
Protein GI89900057 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAC TATTTGATCT GATCGCGGGC GCTTGCGCTG GGCTGGTCTT GTTGCTGCCG 
ATTGTGCTGG TCGCCTTGGC GGTGCGCCTG ACTTCAAAAG GGCCAGCCCT GTATTGGTCT
GACCGGGTGG GGCGCAACAA CAAGATTTTC AAAATGCCCA AGTTCCGCAG CATGCAGATC
GGCACCCCTG CGGTGGCGAC TCATTTGCTG AGCAACCCGG ATGCTTACCT GACACCCATC
GGCAGCTTCT TGCGCAAAAG CAGCCTGGAC GAACTGCCAC AGTTGTGGAG CATTCTGGCA
GGTGACATGA GTTTTGTCGG GCCACGCCCG GCCCTGTTTA ATCAACACGA CTTGATTGAA
TTGCGCACCC AGCAAGGTGT GCATCCGCTG GTGCCTGGCC TGACTGGCTG GGCGCAGGTG
AATGGGCGCG ATGAGTTGCC CATTCTGGAC AAGGTGAAGC TCGATGTGGA ATATTTGCAC
CACCGGTCGC TCTGGTTTGA CATTCGCATT TTGTGGCTGA CGCTGGTGAA GGTGTTGCGG
CGGGATGGGG TGTCGCATTG A
 
Protein sequence
MKRLFDLIAG ACAGLVLLLP IVLVALAVRL TSKGPALYWS DRVGRNNKIF KMPKFRSMQI 
GTPAVATHLL SNPDAYLTPI GSFLRKSSLD ELPQLWSILA GDMSFVGPRP ALFNQHDLIE
LRTQQGVHPL VPGLTGWAQV NGRDELPILD KVKLDVEYLH HRSLWFDIRI LWLTLVKVLR
RDGVSH