| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1253 |
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| Symbol | |
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| ID | 3962030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1346461 |
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| End bp | 1347579 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637916067 |
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| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
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| Protein accession | YP_522518 |
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| Protein GI | 89900047 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.526463 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATACTG TAAGATTATC AAAATCATGC GTAGGTCAAG AAGAAAAAGA TGCCGTTTGC
CGTGTTATTG ATGCTGGTTA CCTTGGAATG GGCAAAGATG TACAGCTTTT TGAAGAGGAA
ATAGCTGATT ATCTAGGCAC TGAATTAGAG GTGATTTGCG TTAATACGGG TACCGCTGCA
CTTCACTTGG CTTTACTTTG CCTTGATATT GGCTCAGGTG ATGAGGTCTT AGTACCCAGC
ATTACTTACG TAGCATCTTT TCAAGCGATA GCTGCCACTG GTGCCAAACC AATAGCGTGC
GACGTAACCG CTGATAGAGT ATTTATCGAC CTAGAAGATG CAGCAAAGCG ATTGACGAAA
CGTACCAAGG CAATCATGCC CGTTCACTAT GCCAGCGATA GCCAGAGTAT GGATGCTGTG
TATGCATTTG CGGCAATCCA TGGTTTGCGC GTCGTTGAAG ATGCAGCTCA TGCTTTTGGT
TGCGTTCGTC ATGGCGCAAG GGTTGGGACG GTTGGTGACG TTATTTGCTT TAGTTTCGAT
GGGATTAAGA ATATTACGTC TGGTGAAGGC GGCGCAGTTA TTACTGGTGA TATAGAGCTT
GCGCGACGAA TTAAAGATGC ACGCTTGTTA GGTGTTGAGA AAGATACCGA TAAACGTTAC
CAAGGTCAAC GTAGCTGGAG CCTAGATGTT AAGCACCAAG GCTACCGATA CCACATGAGC
AATTTGATGG CGGCGATAGG GAGCGAACAG CTTAAAAAGG TTAACAAATT TAGCGAACAC
CGGAAAGCCT GTGTTACTCG TTATCGAGCG GGCTTGGCTG GTGTGAAAGG GCTTGCATTT
CTTGATTTAA ATTATGCGGA TATTGTTTCC CACATCTTTG TGGTTCGCAT CACGGATGGG
CGGCGAGATC GGCTTATGGA GAGGTTGCGT TCTAAAAAAA TTGAGTGTGG AATTCACTAC
ATGCCCAATC ATTTACTTGA TTATTTTAAG ACACCTTACT CATTACCAAC AGCTGAGATG
TTGGGATGCG AACTGCTAAG CCTGCCACTT CATGCGGACC TATCGTTTGC CGATCAAGAT
AGGGTAATAG CAGAAGTGCT AAAGTTATTA GCATCTTGA
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| Protein sequence | MNTVRLSKSC VGQEEKDAVC RVIDAGYLGM GKDVQLFEEE IADYLGTELE VICVNTGTAA
LHLALLCLDI GSGDEVLVPS ITYVASFQAI AATGAKPIAC DVTADRVFID LEDAAKRLTK
RTKAIMPVHY ASDSQSMDAV YAFAAIHGLR VVEDAAHAFG CVRHGARVGT VGDVICFSFD
GIKNITSGEG GAVITGDIEL ARRIKDARLL GVEKDTDKRY QGQRSWSLDV KHQGYRYHMS
NLMAAIGSEQ LKKVNKFSEH RKACVTRYRA GLAGVKGLAF LDLNYADIVS HIFVVRITDG
RRDRLMERLR SKKIECGIHY MPNHLLDYFK TPYSLPTAEM LGCELLSLPL HADLSFADQD
RVIAEVLKLL AS
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