Gene Rfer_1229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1229 
Symbol 
ID3961219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1319612 
End bp1320520 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content65% 
IMG OID637916043 
Productpeptidase C14, caspase catalytic subunit p20 
Protein accessionYP_522494 
Protein GI89900023 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTCG ACAAGACCGC AAACACAAAG GCACGGGGAC TCTCCTTGCA CATCGGCCTC 
AACAGCGTCA ACGGCGACGC CTACAGCGGC TGGACGGGGC CACTGGCCGC CTGCGAGTTC
GACGCCAACG ACATGGCGGC CATCGCGAAA ACCAGGGGCA TGAAGTCCAC GGTGCTGCTG
ACCAAAAAGG CCACGCGCGC CAACACGCTG GCCGGCCTGC GCAGCGCGGC CAAGTCGCTG
AAGGCGGGCG ACCTGTTCTT CATGAGCTAC TCCGGCCACG GTGGCCAGGT GCCCGACGTG
AACGGTGACG AGCCGGACAA GAAGGACGAA ACCTGGTGCC TGTTTGACGG CCAGCTGATC
GACGATGAGC TCTACCTGGA GCTCAGCAAG TTCAAGGCCG GCGTGCGCAT TCTGGTGCTG
TCCGACAGCT GCCACAGCGG CAGCGTCACG CGCGAGCTGC CGCCGCCGCC ACCACCACCC
GGCCAGCGCA TCAAGCTGAT GCCCGATGCC GTGGCCCGGC GCGTCTATGG TGAACACCAA
GCCTTCTACG ACAAGCTGCA GCAGGACGTC ACCGACGCTG CCAGCAAGGC CGGCGTGGAC
CCGGATGCAG CGCTGGCGGC ACTGACGCAA GTCGGCGCGG CAGCCCATGC AACCGCGCTC
GTTGGCAGCT TTCACCCGGC CGTCATCCTG ATCTCCGGCT GCCAGGACAA CCAGACCTCG
ATGGACGGCG AGCACAACGG CGCCTTCACG GAAGCGCTGC TGAAAGTCTG GAACCTGGGC
AAGTTCAGCG GCAACTACGA CACCTTCCAC ACGCGTATCC GCGCCGCCCT GCCTACCGGT
CAATCACCCA ATTTGTTCAC GCTGGGCCAG GCGGGGAACT TCCTGGCACA AACACCTTTC
ACGGTCTGA
 
Protein sequence
MAFDKTANTK ARGLSLHIGL NSVNGDAYSG WTGPLAACEF DANDMAAIAK TRGMKSTVLL 
TKKATRANTL AGLRSAAKSL KAGDLFFMSY SGHGGQVPDV NGDEPDKKDE TWCLFDGQLI
DDELYLELSK FKAGVRILVL SDSCHSGSVT RELPPPPPPP GQRIKLMPDA VARRVYGEHQ
AFYDKLQQDV TDAASKAGVD PDAALAALTQ VGAAAHATAL VGSFHPAVIL ISGCQDNQTS
MDGEHNGAFT EALLKVWNLG KFSGNYDTFH TRIRAALPTG QSPNLFTLGQ AGNFLAQTPF
TV