Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1229 |
Symbol | |
ID | 3961219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 1319612 |
End bp | 1320520 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637916043 |
Product | peptidase C14, caspase catalytic subunit p20 |
Protein accession | YP_522494 |
Protein GI | 89900023 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATTCG ACAAGACCGC AAACACAAAG GCACGGGGAC TCTCCTTGCA CATCGGCCTC AACAGCGTCA ACGGCGACGC CTACAGCGGC TGGACGGGGC CACTGGCCGC CTGCGAGTTC GACGCCAACG ACATGGCGGC CATCGCGAAA ACCAGGGGCA TGAAGTCCAC GGTGCTGCTG ACCAAAAAGG CCACGCGCGC CAACACGCTG GCCGGCCTGC GCAGCGCGGC CAAGTCGCTG AAGGCGGGCG ACCTGTTCTT CATGAGCTAC TCCGGCCACG GTGGCCAGGT GCCCGACGTG AACGGTGACG AGCCGGACAA GAAGGACGAA ACCTGGTGCC TGTTTGACGG CCAGCTGATC GACGATGAGC TCTACCTGGA GCTCAGCAAG TTCAAGGCCG GCGTGCGCAT TCTGGTGCTG TCCGACAGCT GCCACAGCGG CAGCGTCACG CGCGAGCTGC CGCCGCCGCC ACCACCACCC GGCCAGCGCA TCAAGCTGAT GCCCGATGCC GTGGCCCGGC GCGTCTATGG TGAACACCAA GCCTTCTACG ACAAGCTGCA GCAGGACGTC ACCGACGCTG CCAGCAAGGC CGGCGTGGAC CCGGATGCAG CGCTGGCGGC ACTGACGCAA GTCGGCGCGG CAGCCCATGC AACCGCGCTC GTTGGCAGCT TTCACCCGGC CGTCATCCTG ATCTCCGGCT GCCAGGACAA CCAGACCTCG ATGGACGGCG AGCACAACGG CGCCTTCACG GAAGCGCTGC TGAAAGTCTG GAACCTGGGC AAGTTCAGCG GCAACTACGA CACCTTCCAC ACGCGTATCC GCGCCGCCCT GCCTACCGGT CAATCACCCA ATTTGTTCAC GCTGGGCCAG GCGGGGAACT TCCTGGCACA AACACCTTTC ACGGTCTGA
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Protein sequence | MAFDKTANTK ARGLSLHIGL NSVNGDAYSG WTGPLAACEF DANDMAAIAK TRGMKSTVLL TKKATRANTL AGLRSAAKSL KAGDLFFMSY SGHGGQVPDV NGDEPDKKDE TWCLFDGQLI DDELYLELSK FKAGVRILVL SDSCHSGSVT RELPPPPPPP GQRIKLMPDA VARRVYGEHQ AFYDKLQQDV TDAASKAGVD PDAALAALTQ VGAAAHATAL VGSFHPAVIL ISGCQDNQTS MDGEHNGAFT EALLKVWNLG KFSGNYDTFH TRIRAALPTG QSPNLFTLGQ AGNFLAQTPF TV
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