| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1223 |
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| Symbol | |
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| ID | 3963548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1310209 |
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| End bp | 1311108 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637916037 |
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| Product | ABC-type transport system periplasmic component |
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| Protein accession | YP_522488 |
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| Protein GI | 89900017 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCTGG TCCTGGTCAC GGCCCTGATC TGCGGTTTTT TGCTGTACGT GATGTACGCG
CGCGGCGTGT TCGAGAAAAC CCAGCAGCTG GTGCTGGTGG CCGACGACTC CGAAGGTGTG
CTCGTCGGCA TGGATCTCAC CTTCTCGGGC TTTCCCATCG GCCGCGTGCG GCGCATCGAG
CTGGCCTTGG ACGGCAAGGC GCGCATGGTG ATTGACGTGC CTCTCAAGGA CGCGCCCTGG
CTGCGTACAT CAAGCATCTT CACCATGGAA CGCAGCATGG TGGGCGAAAC CCACCTGCGC
GCCTTCAGTG GCATTCTGAG CGACCCGCCC TTGCCGGCCA ACGCGGAGCG CACCGTGCTG
CGCGGCGACA CCAACGCCGA AATCCCCCGC ATCGTGGCGT CGACCCGCAC GCTGCTGGAA
AACCTGGAGA ACATGACCGG GCCGGAGTCC AATATCAACA CCAGCCTGAG TAACCTGAAA
ACAGTCAGCG AGCGCTTGAC CGGCCGCTAT GGGCTACTCA GCGGCGTGAT GGGCAGCGAA
GACAACGCCA AAAAAATCAT CGCCACGCTG GACCAGACCA ACGCGCTGCT GGCCAAGGCC
GATCAACGCA TTTTTGGCGC CAAGGGCGTG ATGGACAGCA CCCAGGCTGC CGTCGATGGC
TCGCAGGTGG CAATTCGGGA GCTCACCGGC GTCTTGACCG ACGCCCGCGC CAGCCTGAAA
AAAGTCGATG CGGTGCTGGC CGAGGCCCAG GCCGTGGGCG CCAATGCGCG CGTTGCCAGC
GCCGACCTGG GTGCGCTGCG CGCCGAGGTC GAGATCAGCC TGCGCAAGGT GACGCAACTG
GTGGAAGAGG TGAACCGCAA ATGGCCTTTT GCGCGGGATA CGGAGATTAA ATTGCCCTGA
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| Protein sequence | MLLVLVTALI CGFLLYVMYA RGVFEKTQQL VLVADDSEGV LVGMDLTFSG FPIGRVRRIE
LALDGKARMV IDVPLKDAPW LRTSSIFTME RSMVGETHLR AFSGILSDPP LPANAERTVL
RGDTNAEIPR IVASTRTLLE NLENMTGPES NINTSLSNLK TVSERLTGRY GLLSGVMGSE
DNAKKIIATL DQTNALLAKA DQRIFGAKGV MDSTQAAVDG SQVAIRELTG VLTDARASLK
KVDAVLAEAQ AVGANARVAS ADLGALRAEV EISLRKVTQL VEEVNRKWPF ARDTEIKLP
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