| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1159 |
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| Symbol | |
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| ID | 3963465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1244281 |
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| End bp | 1245294 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637915975 |
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| Product | TonB-like |
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| Protein accession | YP_522426 |
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| Protein GI | 89899955 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3064] Membrane protein involved in colicin uptake |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain
[TIGR02794] TolA protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.808431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCACGCGG CCACTGATCG TCTTGAGTTT GCGCCACCGC CCACGCCGGG CCTGCTGCGC
TCACTGGCCT TGGCTGTGCT GGCGCACGCG TTTTTGCTGG CCGCCCTGAC CTGGGGCGTG
CACTGGAAGC GCGACGCCAT CAGGGTGACC GCCGAGGCTG AGTTGTGGTC GGCCGTGCCG
CAAGCAGCGG CGCCGAAGCT GGTCGAAGTG CCTATAGAAC CCACAGCCAC ACCAGTCACA
CCGAAACCAC CGGTCGTCAC GCCTGCACCC CCGACTCCAC CCTCTCCGGT GCCGCAGGTT
CAACCCAGCC CGCCCGACCC CAACATCGCC CTTGAGCGCG AGAAATTGCG GGAAAAAAAG
GAACTGGAAC TCAAAAAACA ACAAGCACTG GACAAACAGC GCCTGGAAAA GCAGCGCCTT
GACCAACTGA AGCGGGAAGA ACTCAAGCAA GAAAAGCTGC AGCTTGAGAA AAAGCGCTTG
CAAGACAAAC GCGAAAGCGA CAAAAAAGCC GCTGAAGACA AGAAAGCCGC TGAAGACAAG
AAAAAAGCCG CTGAAGACAA GAAGAAAGCT GCTGAAGACA AGAAAAAAGC AGCCCAAGAG
GCCCAGCGCA AAGAAGCAAT CCAAGCGCAA GAGGACGCCA AAAAACTGGC TGCCCAGCGC
AAAGCCAATA TCGAACGCAT GACCGGCCTG GCAGGCGCCA GCGGCGCGCC TACGGCCAGG
GGCACGCAAC TGCAATCCAG CGGCCCGTCC GGCAGCTATG CCGGACGCAT TCGCACCCGC
ATCAAACCCA ACATCGTGTT CGCCGACGAC ATTAGCGGCA ACCCAGCCGC CGAAGTTGAA
GTTCGTACCT CACCGGACGG CACCATCATC AGCCGCAAGC TCACCAAACC CAGCGGCGTC
AAATCCTGGG ATGAAGCCGT CTTGCGCGCC ATCGACAAAA CCGAAGTACT GCCGCGTGAT
GTCGACGGCC GCGTGCCCAG CGCTTTGGTC ATCAGCTTCC GGCCAAGGGA CTGA
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| Protein sequence | MHAATDRLEF APPPTPGLLR SLALAVLAHA FLLAALTWGV HWKRDAIRVT AEAELWSAVP
QAAAPKLVEV PIEPTATPVT PKPPVVTPAP PTPPSPVPQV QPSPPDPNIA LEREKLREKK
ELELKKQQAL DKQRLEKQRL DQLKREELKQ EKLQLEKKRL QDKRESDKKA AEDKKAAEDK
KKAAEDKKKA AEDKKKAAQE AQRKEAIQAQ EDAKKLAAQR KANIERMTGL AGASGAPTAR
GTQLQSSGPS GSYAGRIRTR IKPNIVFADD ISGNPAAEVE VRTSPDGTII SRKLTKPSGV
KSWDEAVLRA IDKTEVLPRD VDGRVPSALV ISFRPRD
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