| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1144 |
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| Symbol | |
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| ID | 3963450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1227119 |
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| End bp | 1229674 |
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| Gene Length | 2556 bp |
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| Protein Length | 851 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637915962 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_522413 |
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| Protein GI | 89899942 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0307276 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACGA GCGTTATTGC GGTGCGCGAC ATGTTGTCGG TATTGAGCGT GCTGGAAGTC
GAAAAACGCA TTGGCGAGGT GCGCGGTGTC AAAAGCGTTA CCGTGAATTA CGCGGCGGGC
AACGCCACCG TTCGTTATGA CGAAACCCAG CTGGAAGTCG GCGATATCAA GTCGGCCGTG
CGCCAGCACA GTTACGAATC CGTCGCACCA GCCGCTGCTG CCGGTGAAGG CCATACAACA
CAGGGCGTCC CGCCGTCTAC ATCTAACGCC CCTGTGACGG AAACTGCCCC GGACGCGCCT
GCCGCCCCAG CAGTAGAACC GACCGCCGCC GGCACAATCT ACACCTGCCC GATGCACCCC
GAGATTCGCC AGGACCATCC CGGCAACTGC CCCAAGTGCG GCATGACGCT GGAGCCCGAA
CTGCCCAAGC TCGATGACGA TGAAAATCCG GAGTTACGCG ACTTCTCACG TCGCTTCTGG
TGGACCCTGC CGTTGACAGT CATCGTCTTC GTCCTGGCCA TGTTTGGCCA TTTTCAGCAT
TGGATGGATG GGGGGGTGCA GAGCTGGGTT GAACTGGTTC TTGCAACACC GATTGTGTTG
TGGGCTGGTT GGCCCTTCTT TGTGCGTGGC TGGCAGTCGG TGGTGAAACG CAGCCTGAAC
ATGTGGACGC TGATCGGTCT GGGCACCGGT GCTGCTTACA TCTATAGCGT TGCGGCCACC
GTGGCACCCC AGATTTTCCC GGCCTCGTTC GTGTCCATGG GACGGGTTGC GGTGTATTTT
GAAGCGGCGG CGGTGATCAT TTCGCTCACC CTGATGGGCC AACTGCTGGA ACTCAAGGCC
AGGTCCCAGA CCTCGGCGGC GATCAAGTCG CTGCTCGGAC TGGCCCCCAA GACGGCGCGT
CGCATTCTTC CCGATGGCAC TGAGGAAGAC GTGCCCCTGA GCAACGTCCA CGTCGGAGAT
GCCCTGCGCG TGCGTCCGGG CGAAAAAGTG CCCGTGGACG GTACCGTGAC CGAGGGCAGC
AGCGCGGTCG ATGAATCCAT GCTGACTGGG GAACCCGTGC CGGTGAGCAA GCGACTGGGC
GACAAGGTGA TCGGTGCGAC GCTCAATACC AGTGGCGCCC TGGTCATACG GGCCGAAAAA
GTGGGGTCCG CCACCATGCT GGCGCAGATC GTGCAAATGG TGGCCCAGGC GCAACGCTCC
AGGGCGCCGA TGCAACGCAT GGCTGATGTG GTGGCTGGTT ACTTTGTCGC CGCCGTCATG
GTCATTGCCG TATTGACTTT CTCTGTTTGG GGGCTGTTCG GGCCGGAGCC GAGTTGGGTT
TTCGGCCTCG TCAACGCGGT GGCGGTGCTG ATTATCGCCT GCCCTTGCGC CTTGGGACTG
GCGACGCCGA TGTCCATCAT GGTGGCCACC GGGCTGGGGG CCACGCGCGG TGTGCTGTTC
CGCGACGCGG CGGCGATCGA GAACCTGCGC AAGATTGACA CCCTCATCAT CGACAAGACC
GGCACCCTGA CCGAGGGGCA CCCGGCGTTC GATCGGGCGG TCCCTGCGGC AGGGTTTGAG
GCCGACGAGG TACTGCGCCT GGCCGCGAGC CTGGACCAGG GCAGCGAGCA CCCATTGGCC
GAGACGATCG TTCGCGCAGC GCGCGAGCGT GGAATGACGC TGGACAAGCC GGAAAACTTT
GAATCCGCTT CGGGCATCGG CGTGCGCGCT CAGGTCGCGG GGCAGCAGCT TGCCCTTGGC
AATAGCACCA TGATGCAGCA GATCAATGTC TCGGTTGCGC CTCTCATGTC GCAGGCTGAA
GGCTTGCGTG CTGAAGGTGC CAGCGTCATG CATCTGGCGG TCGATGGCAA GCTGGCCGGC
CTGCTGGCGG TGTCCGATCC GATCAAGCAG AGTACACCCG AAGCCTTGGC GACTTTAAAA
GCGGCCGGCC TGCGCATCGT GATGGCCACT GGCGACGGCC TAACCACCGC CAAGGCCGTG
GGGGCGCGAC TGGGCATCGC AGAGGTGCAT GGCGAAGTGA AGCCCGCTGA CAAACTTCTG
CTGGTGGAAA AGCTGCAAAA AGAAGGACGC ATCGTGGCGA TGGCCGGAGA CGGCATCAAC
GATGCACCAG CGTTGGCCAA AGCGGATGTC GGCGTGGCCA TGGGCACCGG CACCGATGTG
GCCATGAACA GTGCACAACT TACGTTGATC AAGGGTGATT TGCGCGCGCT CGCCACCGCG
CGCTTGCTCT CCGAAGCGAC GGTGGCCAAT ATGAAGCAAA ACCTGCTGTT CGCCCTGCTC
TATAACGGGT TGGCGATTCC GATTGCGGCC GGCGTGCTGT ATCCGCTGAC CGGCTGGCTG
CTCTCGCCCA TGATCGCGGC CCTGACCATG AGCCTGAGTT CGGTTTCGGT GATTGGCAAT
GCGCTGCGCT TGAAGCGGAC CAAACTGGCT GGCAACACTC AGCCTGGCAA GACTGCGGAA
ACTGCGGTGG TGCCTGACAA ACCCGCACCC GAAGAAACAG TCAAGGCTTC GGGTGCACCC
AAAAACCAGG AGCCCGACAA GAGACCATCC GAGTGA
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| Protein sequence | MKTSVIAVRD MLSVLSVLEV EKRIGEVRGV KSVTVNYAAG NATVRYDETQ LEVGDIKSAV
RQHSYESVAP AAAAGEGHTT QGVPPSTSNA PVTETAPDAP AAPAVEPTAA GTIYTCPMHP
EIRQDHPGNC PKCGMTLEPE LPKLDDDENP ELRDFSRRFW WTLPLTVIVF VLAMFGHFQH
WMDGGVQSWV ELVLATPIVL WAGWPFFVRG WQSVVKRSLN MWTLIGLGTG AAYIYSVAAT
VAPQIFPASF VSMGRVAVYF EAAAVIISLT LMGQLLELKA RSQTSAAIKS LLGLAPKTAR
RILPDGTEED VPLSNVHVGD ALRVRPGEKV PVDGTVTEGS SAVDESMLTG EPVPVSKRLG
DKVIGATLNT SGALVIRAEK VGSATMLAQI VQMVAQAQRS RAPMQRMADV VAGYFVAAVM
VIAVLTFSVW GLFGPEPSWV FGLVNAVAVL IIACPCALGL ATPMSIMVAT GLGATRGVLF
RDAAAIENLR KIDTLIIDKT GTLTEGHPAF DRAVPAAGFE ADEVLRLAAS LDQGSEHPLA
ETIVRAARER GMTLDKPENF ESASGIGVRA QVAGQQLALG NSTMMQQINV SVAPLMSQAE
GLRAEGASVM HLAVDGKLAG LLAVSDPIKQ STPEALATLK AAGLRIVMAT GDGLTTAKAV
GARLGIAEVH GEVKPADKLL LVEKLQKEGR IVAMAGDGIN DAPALAKADV GVAMGTGTDV
AMNSAQLTLI KGDLRALATA RLLSEATVAN MKQNLLFALL YNGLAIPIAA GVLYPLTGWL
LSPMIAALTM SLSSVSVIGN ALRLKRTKLA GNTQPGKTAE TAVVPDKPAP EETVKASGAP
KNQEPDKRPS E
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