Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1138 |
Symbol | |
ID | 3963444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 1223382 |
End bp | 1224551 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637915958 |
Product | transposase, IS4 |
Protein accession | YP_522409 |
Protein GI | 89899938 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3385] FOG: Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.16162 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACCAAG GCAAGCTCGT ATTTGCGCAA CTCATGCTCT ATGTGCCGCT GAGCACGTTT CGTCGCTGTG TGGCCGACCA CCGTGGCGAA CACAAGGTCA AAGACTTCTC GTGTCTGGAT CAGTTCTTCG CCATGGCATT CGCGCAGTTG ACCTACCGCG AATCTCTGCG CGACATCGAA GTCAACCTTC GCGCTCAGGT GCGTCGGCTG TACCACATGG GGTTTCGCTG CCAGACGATT TCGCGCAATA CGTTGGCCAA CGCGAACGCC ACACGGCGAT GGCAGATCTA TGCCGACTTC GCCCAGCATC TGATTGGCTT GGCGCGTCCC CTGTATGCCA CGGAGCCGTT TGGGCTGGAA CTCGACGCTG CGGTTTACGC GTTCGACGCC AGCACCATCG ACCTGTGTCA GTCTGTTTTT GCCTGGGCAC CGTTTCGCTC GACCAAGGCG GCCATCAAGT TGCACACACT TCTGGACCTG CGCGGCAATA TTCCCAGTTT CATTCACATC ACCGACGGCA AGACGCACGA GGTCAACGTA ATGGACGATC TGGTGCTGGA GCCGGGGGCG TTTTGCCTGA TGGACCGGGG CTATCTCGAT TTCGCACGAC TGTTTGTGAT TCACGAGGCA CAAGCCTTCT TTGTGACGCG CGCCAAAAGC AACACCAAAT TCAAACGGCG CTACTCGCAT CCGGTCGATC GGATCAATAC CACTGTGCTG TGCGACCAAA CGGGCGTGCT CACGACCTAC TATGCAGGCA AGGATTACCC CACGACGCTG CGCCGGGTGG TGGTCAAGGA CGACACCGGA AAACGGCTGG TGTTTTTGAC CAACAACTTT GCCTTGAAGC CCGAGCTGAT CGCCGATCTT TACCGCCAGC GCTGGCAGGT CGAATTGTTC TTCAAGTGGA TCAAGCAGCA CCTGCGCATC AAGGTGTTCT TTGGCACCAG CGAGAACGCG GTCAAGACGC AGATATGGAT TGCCATATCG ACTTACCTGT TGATCGCCAT CACGAAGAAA CGTCTGCGTC TTGATCATCA CAGCCTGTAT GAAATATTAC AAATCTTGAG CCTGTCCATG TTTGAAACTA TCCCGATTAA TCAACTACTT ATGCCACCCT CAACGAATTC AGAGCCGGAT TTCGAGCCCA ATCAGCTCGC TCTCCTCTGA
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Protein sequence | MHQGKLVFAQ LMLYVPLSTF RRCVADHRGE HKVKDFSCLD QFFAMAFAQL TYRESLRDIE VNLRAQVRRL YHMGFRCQTI SRNTLANANA TRRWQIYADF AQHLIGLARP LYATEPFGLE LDAAVYAFDA STIDLCQSVF AWAPFRSTKA AIKLHTLLDL RGNIPSFIHI TDGKTHEVNV MDDLVLEPGA FCLMDRGYLD FARLFVIHEA QAFFVTRAKS NTKFKRRYSH PVDRINTTVL CDQTGVLTTY YAGKDYPTTL RRVVVKDDTG KRLVFLTNNF ALKPELIADL YRQRWQVELF FKWIKQHLRI KVFFGTSENA VKTQIWIAIS TYLLIAITKK RLRLDHHSLY EILQILSLSM FETIPINQLL MPPSTNSEPD FEPNQLALL
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