Gene Rfer_1072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1072 
Symbol 
ID3963495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1145081 
End bp1146352 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content49% 
IMG OID637915893 
Producthypothetical protein 
Protein accessionYP_522344 
Protein GI89899873 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0463115 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCAAAGA AACACTACGA CTGGGCAGAG GGGCCCGCAG AGATCGATGC GCACAGCCTA 
ACCAAGCATG AGGTACTTGT TGGCTATTTA CTGCGCTATT TACAACAACG AACCTTAAAT
GCCAGAGGTC GTGAGCGCCT TCGCATTACT CTGGTTGATG GCTTTTGCGG TGGTGGCCTG
TACACAATAC GTGGACAGTC GAAATTAATT CTTGGCTCCC CTCTTCGAAT GCTGGCTGCA
GTGGATGAGG CACGGATACT CGTCAACAAG GATCGAACCA AGCCACTTGA ACTTGACGTT
CAATACGTGT TCATTGACAA AGATGCAAGC GCAGTCTCGT TTCTAAGCAA GGTTCTACAG
GAGCGTGGCT ACGGAGCGGC CATTGGCAAA AGCATCCACC TGATCCACGA AGAATTCGCC
AAAGTCAATG ATGCCGTGAT TCAACTGATC AAGCGTCATA CACCAAGAGC AGGCACTGCA
CTCTTCTTTC TGGACCAGTA TGGCTACATC GACGTTCCAG CAAACTTGAT TCAACGTATC
TTTTCTGAAC TCCCAGGGAG CGAGGTGGTA TTGACATTCC ACGTATCGTC TTTCGCTACC
TATACCAACG ATCAATTCAC TAATCACGTT TCAGGAAAAT TGGCAATTGA CATTGGGAGC
GCGCTCGGTG GCAGGTCAAT TGAGAAGCTC AAAGAAGATG ACGCTGACTG GCGCAGGTTT
ATCCAAGCCG CTCTATACCA GGCACTGGTA CGAAATTGCG GAGCCCAGTT CTTCACACCT
TTTTTCATTA GGGGCGAAGG TAGCGGACAT GGTGAGTACT GGTTGGTTCA TCTATCTCAA
CATCCGCGCG CCCAAGATGT AATGAAGCAG GTGCATTGGA AGCACCAGAA CCATTTCGTG
CATTACGGTG GTGCCGGTTT AGACATGCTC GCGACTCACA CAATGGGGTT CAGACAGGAA
TTCAATGGCG GATTCCAATT TGATGATGTA GCACGTTCAG AGTCGACGAA AGCATTGGTT
CAACAGTTGG CAACCAATGT CTATGTTCGA AATGTGCCAG TTCAACTCGG TGAATTATTC
TCGTCCACGT GCAACACCTC CCCTGCGACA TCAAGTATGT ATAAAACTGC GCTTGAACAG
TTGGCGGGCC AAAGTGACAT CCTTGTCACT TCAAAGAATG GGAAGCGAAT GACGCGCGCC
AGGTACATGA GTGATACAGA TGTGATTGAA CGCAGTCGTC AATCTAGCCT CTTCAGCACT
TCAATGGGCT AG
 
Protein sequence
MAKKHYDWAE GPAEIDAHSL TKHEVLVGYL LRYLQQRTLN ARGRERLRIT LVDGFCGGGL 
YTIRGQSKLI LGSPLRMLAA VDEARILVNK DRTKPLELDV QYVFIDKDAS AVSFLSKVLQ
ERGYGAAIGK SIHLIHEEFA KVNDAVIQLI KRHTPRAGTA LFFLDQYGYI DVPANLIQRI
FSELPGSEVV LTFHVSSFAT YTNDQFTNHV SGKLAIDIGS ALGGRSIEKL KEDDADWRRF
IQAALYQALV RNCGAQFFTP FFIRGEGSGH GEYWLVHLSQ HPRAQDVMKQ VHWKHQNHFV
HYGGAGLDML ATHTMGFRQE FNGGFQFDDV ARSESTKALV QQLATNVYVR NVPVQLGELF
SSTCNTSPAT SSMYKTALEQ LAGQSDILVT SKNGKRMTRA RYMSDTDVIE RSRQSSLFST
SMG