| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1037 |
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| Symbol | |
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| ID | 3963636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1096537 |
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| End bp | 1097418 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637915859 |
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| Product | aminotransferase, class IV |
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| Protein accession | YP_522310 |
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| Protein GI | 89899839 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01121] D-amino acid aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.113158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCAT TGCCCCCCCT GCCCAGCTAC CTCAACGGTG AGTTCACGGA GCTCCCTGAC
GCCAAAATCA GCGTCATGGA CCGTGGCTTC ATTTTTGGCG ACGGCGTGTA TGAAGTCGTG
CCGGTCTACG GCGGACGCTT GTTCCGCTTT GAGCAGCACA TGGCGCGACT CGACCGCAGC
CTAACTGAAG TCCGTATTGC CAACCCTATG ACACAGGCCC AGTGGGCTGA AGTTGCTCTC
AAGCTCGTCA GCTCCTACGC CGCCTACACC GGGGCCAAGG CCGAAAACAT CAACCAGCTG
GTCTACATTC AAATCACCCG CGGCGTGGCC ATGCGCGACC ACGTCATGCC CACCGACATC
ACTCCCACCG TGTTTGTCAT GGCCAACAAG ATGAATTTGC CCACCGATGC ACAACGCAGC
CAGGGCGTGG TCTGCGTCAC CGCAGACGAC TTTCGCTGGG AAAAGGCCCA CATCAAGAGC
ACCAGCTTGT TGGGCTCTGT TCTTGCCCGC CAGATCAGTT TTGATGCGGG CGCAGTGGAA
ACCATCATGT TTCGCGACGG TTTCTTGAGC GAGGCTGCCG CCAGCAACGT CTGGGTCATC
AAGGATGGCA AAGTGCTGGG CACACCCAAA GACAATCTGG TGCTGGAAGG CATTCGCTAT
CGCTTGCTTG AGGAAATCTG CCGCAGCAAG GGCATTGATT TTGAGTTGCG CCGCGTCAGC
CGCGACGAGG TAGTGACTGC CGACGAATTG CTCCTGTCCT CGGCTACCAA AGAGGTGCTG
GCGGTGACCA CCCTGGACGG TCGGCCCGTG GGTGCCGGTC GTCCAGGCCC CGTTTATGCG
CAGCTGTATG CGGGTTACCA GAAGGCCAAA GAACAAGCGT GA
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| Protein sequence | MNALPPLPSY LNGEFTELPD AKISVMDRGF IFGDGVYEVV PVYGGRLFRF EQHMARLDRS
LTEVRIANPM TQAQWAEVAL KLVSSYAAYT GAKAENINQL VYIQITRGVA MRDHVMPTDI
TPTVFVMANK MNLPTDAQRS QGVVCVTADD FRWEKAHIKS TSLLGSVLAR QISFDAGAVE
TIMFRDGFLS EAAASNVWVI KDGKVLGTPK DNLVLEGIRY RLLEEICRSK GIDFELRRVS
RDEVVTADEL LLSSATKEVL AVTTLDGRPV GAGRPGPVYA QLYAGYQKAK EQA
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