Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0938 |
Symbol | |
ID | 3963692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 987697 |
End bp | 988332 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637915765 |
Product | KDPG and KHG aldolase |
Protein accession | YP_522216 |
Protein GI | 89899745 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase |
TIGRFAM ID | [TIGR01182] Entner-Doudoroff aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAACG CACACGAAAA ATTTGAAGCC GCACTGAACC ACATGCCCCT GGTCGCCATT CTGCGCGGCC TGCCTGCGCA GGAGGCACTG GCGGTGGGGG AAGCCCTGAC CAGCACGGGC TGGACCTTGA TCGAAGTCCC GCTCAACTCG CCTGATCCGC TGACAAGCAT AGCCGCCCTG GCCAGCAACT TTCCGAAGGC ATTGATCGGC GCTGGCACGG TGATCACACC GGCCGATGTG CGTAACGTGC ATGCCGCAGG TGGCCAATTG ATCGTGTCGC CCAATTTCAA TCCAATGGTG GTGCGCGAGG CCGTGCGTTT GGGGCTGGTG TGCTTACCCG GCGTGATGAC TGCCACAGAA GCCTTTGCAG CACTGGAGAC TGGTGCCACG GGACTCAAGT TATTTCCAGC TGAGATGATC AGCCCAGCAG TCGTTCGGGC TTTGCGCGCG GTGTTACCCG CAGACACACG ATTGCTGCCG GTGGGGGGGA TTACGCCAGA AAATATTTCC AGCTACTTGA AGGCAGGTGC TAGCGGTTTT GGCATTGGAT CGGCCCTTTA CAAGCCCGGC ACAACGGCGG CCGAGGTGCA GGCCAGCGCC ATGAACTTCA TTGCCGCCTG CCGCGGACCC TGCTAG
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Protein sequence | MMNAHEKFEA ALNHMPLVAI LRGLPAQEAL AVGEALTSTG WTLIEVPLNS PDPLTSIAAL ASNFPKALIG AGTVITPADV RNVHAAGGQL IVSPNFNPMV VREAVRLGLV CLPGVMTATE AFAALETGAT GLKLFPAEMI SPAVVRALRA VLPADTRLLP VGGITPENIS SYLKAGASGF GIGSALYKPG TTAAEVQASA MNFIAACRGP C
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