Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0854 |
Symbol | |
ID | 3963765 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 890186 |
End bp | 892624 |
Gene Length | 2439 bp |
Protein Length | 812 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637915682 |
Product | heavy metal translocating P-type ATPase |
Protein accession | YP_522133 |
Protein GI | 89899662 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCAACCA CCGCTTCTAC CTGTCAGCAC GGCCAACCTC ATGCCCAAAA GTACGGCGAT GCCCACAAAG GGCATGTCTA TGAGGCGGGC ACTTCAATCA CCGTTCTGTC TGTGCCCGAC ATGTGCTGTC CGACCGAGTC CGGGATGGTC GAGAAGGACT TACGGCGGCT GCATGGCGTG ACAAGCATCA CGCCAGACCT CATGCGCCGC CAGGTTCGCG TCGAGTACAC CGGTCTTACC GAAGCAGAAC TCCTGACGGC CGCCCGCCAT TCTGGCCTCG CGGTCGAACT TCAGGCAGAG GCAGTCCCAG TGCCCCGGAA CTTCGAGCGC TCCGTCATCC TTGTCGAGCA GATGGATTGC CCGACGGAAG AGGCACTCAT CCGCAAGCGT CTTGCCTGCG CCGATGGCGT CGCCGCGATG ACGTTCAACC TGATGCAGCG CCGGTTAACT GTTGACCATG CGCCGGGACA GCTGCCAGAT GTTCTGAAGG CATTGCAGGA GATTGGCCTG GGAGGAACGG TGGAGCCTTC TGGGACGGCG CAAGTCCAGC CGCCCGCATC GCAAAGGCAC GCTTCAAGTT ACTGGAAGCT GATTCTGGGT GGCGTAGCCG CTGTTGCGGC GGAGGCGCTT GCATTCTCGG TTGGCGATGC GCACTGGGGC GTCATTGGGC TCACGCTGCT GACCATTGCG CTGACCGGAC TGGGGACTTA CAGAAAAGGT TGGTTTGCTG TGCGACAGCT CAACCTCAAT ATCCACGCCC TCATGTCGGT GGCGGTCACG GGTGCTGTGT TTATTGGTCG ATGGCCAGAG GCGGCCATGG TGATGTTCCT CTTCGCCGTG GCAGAGATGA TTGAAGCAAA GTCACTCGAC CGTGCGAGGC GGGCTGTTGA GGGCTTGATG GCGATGACCT CGGATACGGC CACAGTGAAG GTCGCTGACG GCTGGGAGAT AGTCCCTGCC GCCGGCGTCG CCATAGGCAC CTTGGTGCGT GCGCGCCCAG GCGAACGCAT TGCGCTGGAT GGCCAGGTGG TCAGCGGCTC AACTACCGTG GACCAGGCGC CCATTACGGG CGAGAGTATT CCAGTCGACA AGTCCATCGG CGACCCGCTG TTTGCCGGGA CCATCAACCA AGGTGGCGAA GTGGCGTACC GGACCACGGC GCCAGCGAAC GACTCAACGC TGGCACGCAT TGTTCGTGCG GTGCAGGACG CGCAAGCTTC CAAGGCGCCG ACGCAGCGCT TTGTCGATAC CTTTGCCACG TACTACACGC CCATCGTGTT CGGCATCGCG ATGGCGGTCG CGGCGCTGCC GCCATTGGTC GCGGGTGGTG ACTGGTTGAC CTGGGTTTAC CGGGCGCTGG TCATGCTGGT CATTGCCTGT CCGTGCGCTC TGGTGATATC GACACCGGTC ACAGTCGTTT CCGGACTCAC CGCCGCAGCA CGCCGGGGCA TTCTCATCAA GGGCGGCCTT TTCCTGGAAC AGGGACATCG ATTGACCGTG CTGGCGCTCG ACAAGACCGG AACGCTGACC CAGGGACGGC CCTCGCTGAC CGATATCGTT GCGCTGCATG GCACGCAAGA CGAGCAGCTT CGCCTCGCCG CGGCACTCGC CCGGCGCAGC GACCATCCGG TCTCGATGGC GGTCGGTGCG TATGCCGGCG ACCGTTTCCC GCCGCTGGAC GTGGCCAGTT TCAAGGCCAT AAACGGGCGT GGCGTCGAAG GCGTCATTGA GGGTGTGTCG TATCTGCTGG GCAACCATCG GTTGGTCGAG GATTTGAACG CCTGCTCACC CGCTCTTGAA CTGAAGCTGA ACGCGCTGGA AGAGCAAGGC AAGACTGCCA TCGTGCTCAT CGGTGATGGG CAGGCGCTCG CCATCTTTGC CGTCGCTGAC GCAGTGCGCC CCCACAGTCG AGAGGCAATT GCCGAACTGA CGGCCCTCGG TATCGAACCC GTGATGCTGA CGGGCGACAA CCGTCACACA GCGCAGGCAA TTGCACGGCA GGTCGGAATA GCGGAGGTGC GCAGCGAATT GCTGCCGGAG CACAAGCTTG AAGCCATAAA AGAATTTCAA TCCCGCGGCG CCGTGGTGGG AATGGTCGGC GACGGCATCA ATGATGCCCC GGCTCTGGCC ACGGCGGATA TTGGGTTTGC AATGGGAGCG GCCGGTACCG ACACCGCCAT TGAGACGGCG GATGTCGCGC TCATGGACGA CGACCCGCGC AAGCTGGTCG GATTTATTCG TCTCTCAAGA GCAACGCATT CCGTTTTGTG GCAAAACATT GCGCTCGCTC TGGGTATCAA GGCGGTGTTC CTCGCATTGG CTGTTCTCGG ACAGGCGACG CTTTGGATGG CGGTCTTTGC CGATATGGGT GCCAGCCTTC TCGTCGTGTT GAACGGCCTG CGTCTGTTGC GGCATCCGGC GAACGCGTGT AAGCAATGA
|
Protein sequence | MSTTASTCQH GQPHAQKYGD AHKGHVYEAG TSITVLSVPD MCCPTESGMV EKDLRRLHGV TSITPDLMRR QVRVEYTGLT EAELLTAARH SGLAVELQAE AVPVPRNFER SVILVEQMDC PTEEALIRKR LACADGVAAM TFNLMQRRLT VDHAPGQLPD VLKALQEIGL GGTVEPSGTA QVQPPASQRH ASSYWKLILG GVAAVAAEAL AFSVGDAHWG VIGLTLLTIA LTGLGTYRKG WFAVRQLNLN IHALMSVAVT GAVFIGRWPE AAMVMFLFAV AEMIEAKSLD RARRAVEGLM AMTSDTATVK VADGWEIVPA AGVAIGTLVR ARPGERIALD GQVVSGSTTV DQAPITGESI PVDKSIGDPL FAGTINQGGE VAYRTTAPAN DSTLARIVRA VQDAQASKAP TQRFVDTFAT YYTPIVFGIA MAVAALPPLV AGGDWLTWVY RALVMLVIAC PCALVISTPV TVVSGLTAAA RRGILIKGGL FLEQGHRLTV LALDKTGTLT QGRPSLTDIV ALHGTQDEQL RLAAALARRS DHPVSMAVGA YAGDRFPPLD VASFKAINGR GVEGVIEGVS YLLGNHRLVE DLNACSPALE LKLNALEEQG KTAIVLIGDG QALAIFAVAD AVRPHSREAI AELTALGIEP VMLTGDNRHT AQAIARQVGI AEVRSELLPE HKLEAIKEFQ SRGAVVGMVG DGINDAPALA TADIGFAMGA AGTDTAIETA DVALMDDDPR KLVGFIRLSR ATHSVLWQNI ALALGIKAVF LALAVLGQAT LWMAVFADMG ASLLVVLNGL RLLRHPANAC KQ
|
| |