Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0831 |
Symbol | |
ID | 3964190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 868425 |
End bp | 870860 |
Gene Length | 2436 bp |
Protein Length | 811 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637915661 |
Product | ATP-dependent protease, putative |
Protein accession | YP_522112 |
Protein GI | 89899641 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1067] Predicted ATP-dependent protease |
TIGRFAM ID | [TIGR00764] lon-related putative ATP-dependent protease |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.726223 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAAGC CCACGGAACT TCTGCCCCCA CTTGCGCTTG AAACCCGCCA GTTGCATCAC GCGTGTGATC CGGCGCAATT TGGGTTCCAA ACCACCGCGG AACTGGAGGC CTTAAGCGAA TTGATTGGCC AGACCCGCGC CACAGAGGCC GTGCGCTTCG GCGCGGGCAT CCGGCGTGAG GGCTACAACA TCTTTGTCCT GGGGCCCGCT GGCGTGGGCA AACGCAGCAT GGTGGGCCAG TTTCTGGCCA AAAAGGCAGA GGCCGAGCCC AAGTCGTCCG ACTGGTGCTA CCTCAACAAC TTCGCGCAGC CGCACAAGCC CCGGGCCATC CGGCTGCCAT CGGGCAAGGG CCTGGAATTG CAGCAGCAGA TGGCGCAATT GGTTGACTAC TTGCGCTCGG CCATTCCTGC CTTGTTTGAG AGTGAGGAAT ACCGGGCCAA GGCGGGGGCC ATCCAGGATG AATTCACCAA ACGGCAAGAG AGTGCTTTCA AGGAACTGGG TGAGGACGCT GTCAAGCAGC AGATCGTGCT GCTGCGCACG CCTGGCGGGT TTGCGTTTGC CCCCACCCAA AACCAGGAAG TGATCACGCC CGACGAGTAC GAAAAACTGC CACAGGAAGA AAAAGACCGG ATCAGGCAAG TGATCGCCGA GCTGCAGGAA CGACTTGAAA AAATATTGAG CCACGTGCCC CAGTGGATGA AAGAGCGCGG CGAACAGATC AAGCAGCTTA ACCGCCAGAC CACGCGCGCC GTCGTCACGC ATGTGATGGA CGAACAGCGC ACCCGATTCT CCGATCTGCC TGAAATCCGG ACCTACCTCG ACCTCGTGCA GCAGGACATG ATTGAGAACG CCGACGACTT TCGCAATGAG GAGGAATCGG CCAATCTCTC TGGCTTGATG GTGGTCACCC GCAAAACCTT TCATCGCTAC CAGGTGAATG TGCTGGTCAG CAACGGTGAG CACGGCGGCG CCCCGATCGT GAGCGAGGAC AACCCGACCT ACAGCAACTT GATCGGTCGG GTCGAGCACA TTGCCCAACT GGGCGCGCTG GTGACCGACT TCACCCTGAT CAAACCGGGT GCGCTGCACC GCGCCAATGG CGGCTACCTG CTGCTCGACG TGCGCAAAGT GCTGCTGCAA CCGTTTGCGT GGGACGCCCT GAAGCGCGCC CTGCAGGCGC GCGAGATCCG CATCGAATCG CTCGGGCAGA TGTACAGCCT GGTGAGCACC GTCTCGCTGG AGCCGGAGCC GATGCCGCTG GATGTCAAGA TTGTGCTGTT TGGCGATCGC CTGTTTTATT ACCTGCTGCA GCAATACGAC CCCGACTTTT CTGAACTGTT CAAGGTGGCG GCCGACTTCG AGGACCGCAT CGAGCGCAGT GCCGAGACCC ATCTGCTCTA TGCCCGTTTG ATCGCCACGC TCTGCGCGAA AGAAAAATTG TTACCACTCG ACAGCGGCGC CGTCGCGCGG GTGATTGAGC ACAGTGCGCG ACTGGTCGGC GATGCGCAGC GCCTGTCTAC CCATATGCGA AGCATTGCGG ATTTGCTGCA GGAGGCCGAT TTCTGGGCGC GCGAGGCGGG TCTGGCGGTG GCAACGGCAA GCAACGTGCA GCAAGCCATT GACGCTCAAA TTCGTCGGCA AGACCGGCTG CGCACCCAGT TGCAGGACGC GATTCTGCGC GACACCTTAT TGATCGACAC GCAAGGGGCA GTAGTGGGCC AGATCAACGG CCTGTCGGTG CTCGAACTGG GGGACTTTGC CTTTGCCCAG CCGACCCGCA TTACCGCCAC CACTCGCCTG GGTCAGGGGG AAATGATCAA CATTGAGCGC GAAGTCAAGC TCTCCGGCGC CATCCACTCC AAGGGGGTGC TGATTCTTTC CTCATTTCTG GCCGCCCGCT ACGCGCGCAA CCAGCCTTTG TCTTTGACTG CCAGCCTGGT GTTTGAGCAG TCCTATGGCC AGGTCGAGGG CGACAGCGCA TCCTTGGCCG AACTGTGTGT GCTGCTGTCC AACCTGGCCA ACGCGGCGGT GCGGCAATCC CTGGCGGTGA CGGGTTCGGT CAATCAGTTA GGCCAGGTGC AGGCGATTGG GGCCGTCAAC GAAAAAATCG AGGGTTTTTT TGACATTTGC GCGGCGCGCG GATTGACCGG TGAGCAGGGG GTGTTGATAC CCGGCACCAA CGTCAAGCAC TTGATGCTGC GCCGCGATGT GGTCGCGGCA GCAGAGAATG GGCAGTTCCA CATCTACGCG GTTGACCATG TGGATCAGGC GATGACGATT CTTACCGGCG TGCCGGCGGG AGAGGCGGGG GCAGACGGTC AATACCCGAT GGAGAGCATC AATCGCCGGG TCGCGGCGCG GGTGGCTGGA CTCAGCGCCT TGCGCAAAGC GTTTGCCCAC CCGTCGGAAG AGAAAAAAAT GGACCGGAGC CATTGA
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Protein sequence | MIKPTELLPP LALETRQLHH ACDPAQFGFQ TTAELEALSE LIGQTRATEA VRFGAGIRRE GYNIFVLGPA GVGKRSMVGQ FLAKKAEAEP KSSDWCYLNN FAQPHKPRAI RLPSGKGLEL QQQMAQLVDY LRSAIPALFE SEEYRAKAGA IQDEFTKRQE SAFKELGEDA VKQQIVLLRT PGGFAFAPTQ NQEVITPDEY EKLPQEEKDR IRQVIAELQE RLEKILSHVP QWMKERGEQI KQLNRQTTRA VVTHVMDEQR TRFSDLPEIR TYLDLVQQDM IENADDFRNE EESANLSGLM VVTRKTFHRY QVNVLVSNGE HGGAPIVSED NPTYSNLIGR VEHIAQLGAL VTDFTLIKPG ALHRANGGYL LLDVRKVLLQ PFAWDALKRA LQAREIRIES LGQMYSLVST VSLEPEPMPL DVKIVLFGDR LFYYLLQQYD PDFSELFKVA ADFEDRIERS AETHLLYARL IATLCAKEKL LPLDSGAVAR VIEHSARLVG DAQRLSTHMR SIADLLQEAD FWAREAGLAV ATASNVQQAI DAQIRRQDRL RTQLQDAILR DTLLIDTQGA VVGQINGLSV LELGDFAFAQ PTRITATTRL GQGEMINIER EVKLSGAIHS KGVLILSSFL AARYARNQPL SLTASLVFEQ SYGQVEGDSA SLAELCVLLS NLANAAVRQS LAVTGSVNQL GQVQAIGAVN EKIEGFFDIC AARGLTGEQG VLIPGTNVKH LMLRRDVVAA AENGQFHIYA VDHVDQAMTI LTGVPAGEAG ADGQYPMESI NRRVAARVAG LSALRKAFAH PSEEKKMDRS H
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