| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0771 |
|---|
| Symbol | |
|---|
| ID | 3964149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 808088 |
|---|
| End bp | 809107 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637915601 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_522052 |
|---|
| Protein GI | 89899581 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.417869 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGCCCC GCTCCCACCT GTCCCCCTCG ATCTCCTGTG TCATTCCCGC CTTCAACGAG
GCGAGCAACC TGGGCACGGT ACTGCCCCAG ATTCTGGCAA CCCTCTCAAT CCTGAGCCAG
CGCGTTGAGC TGGTCGTGGT CGACGATGGC AGTCGGGACG ACACCACGCA GGTCATGCAG
GCCCTGTGCG CAGTCCACCC TGAAATTCTT TACATCAAAT TGTCACGCAA CTTTGGCAAG
GAGCCCGCGC TGACTGCTGG CATTGATGCC GCGCGGGGCG AGGTGGTGGT TTTGATGGAT
GCCGATGGCC AACACCCGGT GTCGCTGCTG CCCGAGATGT TCAAGAAATG GCAGCAAGGC
TCGGACGTGG TCTATGCGGT GCGAAAAACG CGTGACGACC AGTCCGGGCT GCAGTCGAGC
CTGACCGGCC TGTTTTACAA AATGGTTAAC TTTGGTAACC GGGTCAAGAT TCCGGCCAAC
GCAGGCGACT TTCGGCTGAT GGACCGCATG GTGGTTGATG CCCTGAAAAG CCTGCCTGAG
CGCAACCGCT TCATGAAAGG GCTGTACGCC TGGGTTGGTT TTAACAGCAC GGCCATTGAC
TACCAGCCGC TGCCGCGCGC TGACGGCAAA AGCAACTTTG GCCTGCGCGG CTCGCTGTCG
CTGGCGCTGA CCGGCATTCT GGCTTTTTCC ATTGCCCCCT TGCGCGCCTT GACAGCGACC
GGCCTGGTGC TGTCGGCGCT TGCCTTGGGC TACGGCGCTT GGGTGGTGGG GGATTACTTT
ATCTCGGGCA TCGCCGTTCC GGGCTATGCC ACGATTGTGG TCGGCATGAT GTTTTTCAGC
GGCATCCAGC TGCTCTCCAT CGGCGTGCTG GCGGAGTATG TGGGACGCAT CTACGAAGAG
GTCAAACAGC GCCCGCCGTA TCTCATCAGT CAACGCACGG GCAGTGGCTT GGCTGAGCCC
CTGTATGCGC CGGAGGCTGG CAATCCGCCT TTGATACTGC AACAGTCTTC CTTGCTTTGA
|
|---|
| Protein sequence | MMPRSHLSPS ISCVIPAFNE ASNLGTVLPQ ILATLSILSQ RVELVVVDDG SRDDTTQVMQ
ALCAVHPEIL YIKLSRNFGK EPALTAGIDA ARGEVVVLMD ADGQHPVSLL PEMFKKWQQG
SDVVYAVRKT RDDQSGLQSS LTGLFYKMVN FGNRVKIPAN AGDFRLMDRM VVDALKSLPE
RNRFMKGLYA WVGFNSTAID YQPLPRADGK SNFGLRGSLS LALTGILAFS IAPLRALTAT
GLVLSALALG YGAWVVGDYF ISGIAVPGYA TIVVGMMFFS GIQLLSIGVL AEYVGRIYEE
VKQRPPYLIS QRTGSGLAEP LYAPEAGNPP LILQQSSLL
|
|---|
| |