Gene Rfer_0712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0712 
Symbol 
ID3963954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp753416 
End bp754546 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content60% 
IMG OID637915543 
Productnucleotidyl transferase 
Protein accessionYP_521994 
Protein GI89899523 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCGA AAAAGAACAG GAAAAATATA ACCAAAGGCA TGATTCTGGC GGCCGGCCAA 
GGCACCCGCG TGCGCCCCCT GACCCTGGAC CTGCCCAAGC CCATGGTGCC GATTCTGGGC
AAACCGGTGA TGGAGTACCT GATTGAGCAT CTGGCCCGCC ACGGCATCAC CGAGATCATG
GTCAACGTCG CCTGGAACCA CCAGAAAATT GAAGAATATT TTGGTGATGG CAGTCGTTGG
GGCGTGGAGA TTGGCTATGC CTACGAGGGC GTGCGTGACC ACGGCGACAT CCTGCCCCGT
CCCATGGGCT CAGCCGGCGG CATGCGGCGG ATCCAGGACT TCGGCGGCTT TTTTGATCAG
ACCACGCTGG TGCTGTGCGC CGATGCCTTG ATTGACCTCG ACATCACGGC GGCCATTGCT
GAACACAAGG CCAAAGGTGC CATCGCCAGC GTCGTCGCAC TCGATGTACC GCTGGCCGAA
GTGCAGGCGT ACGGCATAGT GGTGGCAGGA CCGGACGGGC GCATTGAAGC CTTTCAGGAA
AAGCCCGCAC CAGCCGAGGC CAAATCCACG CTGGCCAGCA CCGGTATCTA TATTTTTGAA
CCCGAGGTGC TCAAACTGGT GCCCCCCAAC ACGATTTATG ACATCGGCTC GCAGTTGTTT
CCGCAACTGG TGGAGCAGAA GCTGCCGTTT TATGTCCAGA ACCGGCCCTT TAACTGGATC
GACATTGGCC GGGTCAGTGA CTACTGGTCG GTGTTGCAGC GCGTGCTGCG CGGTGAAGTG
GAGCAGATGA AAATGCCCGG GCGCGAAGTC AAACCTGGCA TCTGGGTCGG GCTCAACACC
AATATTGCCT GGGACGAGGT CACGATTGAA GGCCCGGTCT ATATCGGCGC CAGCGTGCGC
ATCGAGCCCG GCGTCACCAT CACCGGGCCG GCCTGGATCG GCCACGGTTG CCACATTCGC
ACCGGCGCCA AGTTGGTGCG CAGCATCTTG TTTGAATACA CCCGCATCGC GGCCGACATG
CGCTTTACCG AAATGATTGT CTCGCCCGAC TACTGCGTTG ATCGCCACGG CGAGACCTTG
TACCGCGGCG ACGACACGTC ACAGTTGCGC TGGGGTGATG CCCGCGCCTG A
 
Protein sequence
MKPKKNRKNI TKGMILAAGQ GTRVRPLTLD LPKPMVPILG KPVMEYLIEH LARHGITEIM 
VNVAWNHQKI EEYFGDGSRW GVEIGYAYEG VRDHGDILPR PMGSAGGMRR IQDFGGFFDQ
TTLVLCADAL IDLDITAAIA EHKAKGAIAS VVALDVPLAE VQAYGIVVAG PDGRIEAFQE
KPAPAEAKST LASTGIYIFE PEVLKLVPPN TIYDIGSQLF PQLVEQKLPF YVQNRPFNWI
DIGRVSDYWS VLQRVLRGEV EQMKMPGREV KPGIWVGLNT NIAWDEVTIE GPVYIGASVR
IEPGVTITGP AWIGHGCHIR TGAKLVRSIL FEYTRIAADM RFTEMIVSPD YCVDRHGETL
YRGDDTSQLR WGDARA