| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0659 |
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| Symbol | |
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| ID | 3963844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 682528 |
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| End bp | 684102 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637915490 |
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| Product | lipopolysaccharide biosynthesis |
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| Protein accession | YP_521941 |
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| Protein GI | 89899470 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | [TIGR03007] polysaccharide chain length determinant protein, PEP-CTERM locus subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.413741 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGAGC TCATTAGCCA ATTAGCCACC GCTGCCCGAG GCATGTGGAA GCATCGCTGG
TTGGGCCTGT TGGTGGCCTG GGCGGTTACC GCAATCGGCT TGTTCGTGGT GCTTTCGGTT
CCCGACAAGT ACGAAGCAAC CGCCCGTATT TTTGTGGACA CACAGTCGAT TTTGAAGCCA
TTGATGTCGG GCTTGGCGGT GCAGCCCAAT GTCGATCAGC AGGTGGGGAT GTTGAGTCGC
ACGCTGATCA GTCGCCCCAA TGTTGAAAAA CTTGTTCGCA TGGCCGACCT TGACCTGAAA
ACCCAATCCA AGAGCGAACA CGAGGCCTTG ATTGATCGTT TGATGAAAAC GCTTGAAATC
AAGAATGTGG GCCGGGACAA CCTTTACGTG CTGTCCTACC GCGACACGAG CCCTGACAAG
GCCAAGCGGG TGGTTCAGTC CCTGGTGTCA ATTTTTGTTG AGTCCAGTCT GGGCGATAGC
CGCAAAGACT CCAAGACCGC GCGCAGATTT ATTGACGAGC AGATTCAGAC CTATGTGACG
AAGCTTGAGG AAGCAGAGGC ACGGCTGAAG CAATTCAGGC TTCGCAACAT CGAGCTTCAG
AATGCGGACG GGAAAGACAT GGCCGGACAG ATTGGTGCTG TCAGCAGCCA ACTGAGTCAA
GCCCGTCTGG ACTTGCGCGA GGCAGAGAAC GCGCGGGATT CGGCAAAACG TCAGCTCGAT
GCCGAAAAAG ATCAGAACGC CAACATCACC TCTCGCAGTC TGCTCCAGGA GTCTGCCATG
CAGAGTTCAA CGCCCGAGAT TGATGCGCGT ATTGACGCCC AAAAGCGGCA GCTTGATGGG
CTGCTGCAGC GTTTTACCGA GCAACATCCC GATGTGGTTG GAACCCGGCG ACTGATCCAG
GAACTTGAGA GCACCAAAGC CAAGGAATTG CAGGAACTGC GCAAGACTGC GCTGGCGAAT
CCGGCAGCAG CGTCTGCCAA CAGCATGGCT TACCAGGAGC TCCACCGCCT GCTGGCCTCC
TCCGAGGTGC AGGTGGCTGC GTTGCGGGCC AGGGTGGGCG AGTACGAGAC CCGTTACGCA
CGGGCGCGCG AGTTGATGAA AACCGCCCCT CAAATTGAAG CAGAACTTGC GCAATTGAAT
CGGGACTACG ACATCAACAA GAAGAACTAC AACGACCTGG TTTCCAGACG AGAGTCAGCC
GCCATGTCCG GCGACCTGGA CAGTGCAGCA GGCATGGCCG ATTTTCGTTT GATTGATCCG
CCGCGTGCAT CCCCCCAACC GGTGGCGCCC AACCGTCTGT TGCTGATGCC GCTTGCCCTG
TTGGCCGGCT TGGGTGTCGG ACTGGTCGCG GCCTTTGCTG CCAGTCAATT GCGTGCTGTT
TTTCACGATG GACGCTCCCT GAAAGAGACC CTTGGGTTGC CACTGCTGGG TGTGGTGACC
TTGGTGCTGG ACGATGGGGC GGTACTGAGA GAGAAATTGG AATTGAAAAA GTTTTGGGCC
GCGTCTGGTG GCTTGATTGG CGTTTTTTTA ACCGGGATGA TCATTTTTTC CGTGATGTCC
GGACGGCTAG GATGA
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| Protein sequence | MDELISQLAT AARGMWKHRW LGLLVAWAVT AIGLFVVLSV PDKYEATARI FVDTQSILKP
LMSGLAVQPN VDQQVGMLSR TLISRPNVEK LVRMADLDLK TQSKSEHEAL IDRLMKTLEI
KNVGRDNLYV LSYRDTSPDK AKRVVQSLVS IFVESSLGDS RKDSKTARRF IDEQIQTYVT
KLEEAEARLK QFRLRNIELQ NADGKDMAGQ IGAVSSQLSQ ARLDLREAEN ARDSAKRQLD
AEKDQNANIT SRSLLQESAM QSSTPEIDAR IDAQKRQLDG LLQRFTEQHP DVVGTRRLIQ
ELESTKAKEL QELRKTALAN PAAASANSMA YQELHRLLAS SEVQVAALRA RVGEYETRYA
RARELMKTAP QIEAELAQLN RDYDINKKNY NDLVSRRESA AMSGDLDSAA GMADFRLIDP
PRASPQPVAP NRLLLMPLAL LAGLGVGLVA AFAASQLRAV FHDGRSLKET LGLPLLGVVT
LVLDDGAVLR EKLELKKFWA ASGGLIGVFL TGMIIFSVMS GRLG
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