| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0656 |
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| Symbol | |
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| ID | 3963899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 680042 |
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| End bp | 681049 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637915487 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_521938 |
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| Protein GI | 89899467 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAC TTTTGACGGG GGCGGCGGGC TTCATTGGCA TGACGACCGC ACTGCGTTTG
TTGGCGCGCG GCGATGAAGT GCTGGGGCTG GACAACCTCA ATGACTATTA CGATGTCACT
CTGAAAGAAA ATCGCCTCAA GCGCTTGAGC CCGCACGCGG GTTTTCGCTT CGTCAAAATG
GACGTGGCTG ATCGGCAGGG CATGGCGCAG CTTTTTGCCG ATGAAAAATT TGACCGCGTC
ATTCACTTGG CGGCCCAGGC CGGTGTGCGC TACTCGCTGC AAAATCCGCA TGCCTATATC
GACAGCAACA TTGTCGGGTT TATGAATGTT CTGGAGGCTT GCCGCCACAC ACAAGTGCAG
CACCTGGTCT ACGCGTCAAG CTCCAGCGTT TACGGTGGCA ACACCAACAT GCCGTTTTCC
GAGCATGACA GTGTGGATCA CCCGGTCAGT CTTTACGCTG CCACCAAGAA AGCCAATGAA
CTGATGGCGC ACACCTACAG TCATTTGTAT GGTCTGCCCA CCACCGGCCT GCGCTTCTTC
ACGGTGTACG GGCCGTGGGG TCGGCCTGAC ATGGCCTTGT TCCTGTTCAC CAAGGCGATC
CTGGAGGGAC GCCCCATCGA CGTTTTCAAC TATGGCCAGA TGCAGCGTGA TTTCACCTTT
GTCGACGATA TCGTCGAAGG TGTCGTTCGG GTACTGGATC GTGTGGCCTG CCCCAATCCG
GTGTACGACC CGGCGCGGGC TGACCCGGCG ACAAGCAACG CGCCCTACCG GGTGTTCAAT
ATTGGCAATA ACAAGCCCGT GCCCTTGCTC GATTTCATCG CCTGTATCGA GGAAGCTTTG
GGCCGCAAGG CGGAGAAAAA TCTATTGCCG TTGCAGGATG GTGATGTGCC CGCCACCTAT
GCCAATACCG ATGCCTTGAA CGATTGGGTG GGTTTTGTAC CCGGCACCCC GATTGAGCAG
GGAATTGCCC GTTTTGTGGC TTGGTATCGC GACTATTACC AGGTGTAG
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| Protein sequence | MKILLTGAAG FIGMTTALRL LARGDEVLGL DNLNDYYDVT LKENRLKRLS PHAGFRFVKM
DVADRQGMAQ LFADEKFDRV IHLAAQAGVR YSLQNPHAYI DSNIVGFMNV LEACRHTQVQ
HLVYASSSSV YGGNTNMPFS EHDSVDHPVS LYAATKKANE LMAHTYSHLY GLPTTGLRFF
TVYGPWGRPD MALFLFTKAI LEGRPIDVFN YGQMQRDFTF VDDIVEGVVR VLDRVACPNP
VYDPARADPA TSNAPYRVFN IGNNKPVPLL DFIACIEEAL GRKAEKNLLP LQDGDVPATY
ANTDALNDWV GFVPGTPIEQ GIARFVAWYR DYYQV
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