Gene Rfer_0642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0642 
Symbol 
ID3963885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp664448 
End bp666337 
Gene Length1890 bp 
Protein Length629 aa 
Translation table11 
GC content61% 
IMG OID637915473 
ProductABC transporter related 
Protein accessionYP_521924 
Protein GI89899453 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.64323 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTAA TTACCTTTCT CAACGCGCAG CTGGCTTTCG GCCATGTTCC CCTGCTCGAT 
CACACCGACT TTGCCCTGGA GACGGGCGAA CGCGTCGGCC TGATCGGGCG CAACGGCACG
GGCAAAACAT CATTTTTGAA AATCCTGGCC GGGCTCGAAA AGGCCGACGA CGGCGTCCTG
CAGTTGCAGC AAAACCTGCG CCTGGCGTAT GTGGCGCAGG AGCCGCAGCT CGATCAGGAT
GCTACTGTTT TTGTAGCTGC TAGTGCAGGT ATCGCGGGGG TTATCGCCCT GATTGATCAA
TATTGCGAGG GGGTTGGCGA TCTCGATGCC CTGCAAAGCC AGATTGAAGC GCAAGGCGGC
TGGAACTGGG AGCAGCGCGT CACCGAAACG CTGCACCGCC TGCATCTGAA CGAAAACGAC
ATCGTCGGCA CACTCTCGGG CGGCACCAAG AAACGGGTCG CGCTGGCGCA GGCCCTGGTA
GCGCAACCGG ACGTGCTGCT GCTCGATGAA CCCACCAATC ACCTCGATCT GGACTCGATC
GAATGGCTGG AAGACCTGCT GATCGGCTTC AAGGGCAGCG TCGTCGCCAT CACCCATGAC
CGGAGTTTTC TGGACCGGGT CGCGACCCGC ATCATTGAGC TGGACCGGGG CATTCTGCGC
TCGTATGAGG GCAATTACGC CCGCTACCAG ATTCTCAAAG AGGAGCAGCT GGCGCAAGAA
GCGGTCATCA GCGCCAAGGC CGACCGGCTG CTGGCGCAAG AAGAAATCTG GATTCGCAAG
GGTGTCGAAG CGCGGCGCAC CCGCAGCGAG AGCCGCATCG TGCGCCTGGA AAACCTGCGT
GCCAGCCGCA AGGCGCACCG CGAAGCCGTC GGCAAGGTCA AAATGGACGT GGCGTCCGGT
GGCTTGAGTG GCAAGCTGGT GGCCGAGTTG ACGCAGGCCA GCCTGTCCTT CGGCGACAAA
GTCATCATCA AGGACTTTTC GGCCACCATT TTGCGCGGCG ACAAAATCGG CTTGCTCGGC
CCCAATGGCG CGGGCAAGAC GACCTTGCTC AAGCTGATTC TGGGCGAATT GGTACCGGAC
AGCGGCAAGA TTCGCCAGGG CACCAACCTG CAGGTCGCCT ACTTTGACCA GATGCGCAAC
GCGCTCGACC TCGACGCCAC GCTGGTGGAC TTCATCAGCC CGGGCAGCGA GTGGATCGAA
ATTGGCAACC AGCGCAAGCA CGTCAAAAGC TACCTGGGCG ACTTTCTGTT CTCACCGGCA
CGCGCCAACT CGCCCGTGCG CTCGCTCTCC GGTGGGGAGC GCAACCGGCT GCTGCTGGCG
CGCCTGTTTG CCCGTCCCGC CAATGTGCTG GTGCTCGATG AGCCGACCAA CGATCTGGAC
ATTGAAACGC TGGAACTGCT GGAAGAACTG CTGCAGAACT ACGCCGGCAC CGTGTTTCTG
GTCAGCCATG ACCGCACCTT CCTGGACAAC GTGGTGACCA GCACCATTGC CTTTGAGGGC
GACGGGCTGT GGCGCGAATA CGAGGGTGGC GTGCAGGACT GGCTGCTGCA ATCCAAACGC
AGCAAAGAAA TTCAGAATGC TACCATTTCA ATAGCTGTTA ACGCACAACA GACGGGGGCT
AGAGGCCAAA AAAACACCAA GTCCAGCGAC AACACGAAAA CCGTGACGGC ACAAAAACTC
AGCAACAAGG CGCAGCGCGA AGTTGACACG CTGCAGGCCA GAATTGACGT CCTGGAGCAG
GAGCAGGCTG CCCTGCGCGC CACCCTGACC GACGCCAACC TCTATGCCAA AGACCCGGCG
CGCGCGACTG AACTTTATGC GCGCGACGCG GCGATTGATG CGGAACTGCT GGCGGCTCTG
ACCCGCTGGG AAGAACTCTC GGCCATCTGA
 
Protein sequence
MALITFLNAQ LAFGHVPLLD HTDFALETGE RVGLIGRNGT GKTSFLKILA GLEKADDGVL 
QLQQNLRLAY VAQEPQLDQD ATVFVAASAG IAGVIALIDQ YCEGVGDLDA LQSQIEAQGG
WNWEQRVTET LHRLHLNEND IVGTLSGGTK KRVALAQALV AQPDVLLLDE PTNHLDLDSI
EWLEDLLIGF KGSVVAITHD RSFLDRVATR IIELDRGILR SYEGNYARYQ ILKEEQLAQE
AVISAKADRL LAQEEIWIRK GVEARRTRSE SRIVRLENLR ASRKAHREAV GKVKMDVASG
GLSGKLVAEL TQASLSFGDK VIIKDFSATI LRGDKIGLLG PNGAGKTTLL KLILGELVPD
SGKIRQGTNL QVAYFDQMRN ALDLDATLVD FISPGSEWIE IGNQRKHVKS YLGDFLFSPA
RANSPVRSLS GGERNRLLLA RLFARPANVL VLDEPTNDLD IETLELLEEL LQNYAGTVFL
VSHDRTFLDN VVTSTIAFEG DGLWREYEGG VQDWLLQSKR SKEIQNATIS IAVNAQQTGA
RGQKNTKSSD NTKTVTAQKL SNKAQREVDT LQARIDVLEQ EQAALRATLT DANLYAKDPA
RATELYARDA AIDAELLAAL TRWEELSAI