Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0642 |
Symbol | |
ID | 3963885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 664448 |
End bp | 666337 |
Gene Length | 1890 bp |
Protein Length | 629 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637915473 |
Product | ABC transporter related |
Protein accession | YP_521924 |
Protein GI | 89899453 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.64323 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATTAA TTACCTTTCT CAACGCGCAG CTGGCTTTCG GCCATGTTCC CCTGCTCGAT CACACCGACT TTGCCCTGGA GACGGGCGAA CGCGTCGGCC TGATCGGGCG CAACGGCACG GGCAAAACAT CATTTTTGAA AATCCTGGCC GGGCTCGAAA AGGCCGACGA CGGCGTCCTG CAGTTGCAGC AAAACCTGCG CCTGGCGTAT GTGGCGCAGG AGCCGCAGCT CGATCAGGAT GCTACTGTTT TTGTAGCTGC TAGTGCAGGT ATCGCGGGGG TTATCGCCCT GATTGATCAA TATTGCGAGG GGGTTGGCGA TCTCGATGCC CTGCAAAGCC AGATTGAAGC GCAAGGCGGC TGGAACTGGG AGCAGCGCGT CACCGAAACG CTGCACCGCC TGCATCTGAA CGAAAACGAC ATCGTCGGCA CACTCTCGGG CGGCACCAAG AAACGGGTCG CGCTGGCGCA GGCCCTGGTA GCGCAACCGG ACGTGCTGCT GCTCGATGAA CCCACCAATC ACCTCGATCT GGACTCGATC GAATGGCTGG AAGACCTGCT GATCGGCTTC AAGGGCAGCG TCGTCGCCAT CACCCATGAC CGGAGTTTTC TGGACCGGGT CGCGACCCGC ATCATTGAGC TGGACCGGGG CATTCTGCGC TCGTATGAGG GCAATTACGC CCGCTACCAG ATTCTCAAAG AGGAGCAGCT GGCGCAAGAA GCGGTCATCA GCGCCAAGGC CGACCGGCTG CTGGCGCAAG AAGAAATCTG GATTCGCAAG GGTGTCGAAG CGCGGCGCAC CCGCAGCGAG AGCCGCATCG TGCGCCTGGA AAACCTGCGT GCCAGCCGCA AGGCGCACCG CGAAGCCGTC GGCAAGGTCA AAATGGACGT GGCGTCCGGT GGCTTGAGTG GCAAGCTGGT GGCCGAGTTG ACGCAGGCCA GCCTGTCCTT CGGCGACAAA GTCATCATCA AGGACTTTTC GGCCACCATT TTGCGCGGCG ACAAAATCGG CTTGCTCGGC CCCAATGGCG CGGGCAAGAC GACCTTGCTC AAGCTGATTC TGGGCGAATT GGTACCGGAC AGCGGCAAGA TTCGCCAGGG CACCAACCTG CAGGTCGCCT ACTTTGACCA GATGCGCAAC GCGCTCGACC TCGACGCCAC GCTGGTGGAC TTCATCAGCC CGGGCAGCGA GTGGATCGAA ATTGGCAACC AGCGCAAGCA CGTCAAAAGC TACCTGGGCG ACTTTCTGTT CTCACCGGCA CGCGCCAACT CGCCCGTGCG CTCGCTCTCC GGTGGGGAGC GCAACCGGCT GCTGCTGGCG CGCCTGTTTG CCCGTCCCGC CAATGTGCTG GTGCTCGATG AGCCGACCAA CGATCTGGAC ATTGAAACGC TGGAACTGCT GGAAGAACTG CTGCAGAACT ACGCCGGCAC CGTGTTTCTG GTCAGCCATG ACCGCACCTT CCTGGACAAC GTGGTGACCA GCACCATTGC CTTTGAGGGC GACGGGCTGT GGCGCGAATA CGAGGGTGGC GTGCAGGACT GGCTGCTGCA ATCCAAACGC AGCAAAGAAA TTCAGAATGC TACCATTTCA ATAGCTGTTA ACGCACAACA GACGGGGGCT AGAGGCCAAA AAAACACCAA GTCCAGCGAC AACACGAAAA CCGTGACGGC ACAAAAACTC AGCAACAAGG CGCAGCGCGA AGTTGACACG CTGCAGGCCA GAATTGACGT CCTGGAGCAG GAGCAGGCTG CCCTGCGCGC CACCCTGACC GACGCCAACC TCTATGCCAA AGACCCGGCG CGCGCGACTG AACTTTATGC GCGCGACGCG GCGATTGATG CGGAACTGCT GGCGGCTCTG ACCCGCTGGG AAGAACTCTC GGCCATCTGA
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Protein sequence | MALITFLNAQ LAFGHVPLLD HTDFALETGE RVGLIGRNGT GKTSFLKILA GLEKADDGVL QLQQNLRLAY VAQEPQLDQD ATVFVAASAG IAGVIALIDQ YCEGVGDLDA LQSQIEAQGG WNWEQRVTET LHRLHLNEND IVGTLSGGTK KRVALAQALV AQPDVLLLDE PTNHLDLDSI EWLEDLLIGF KGSVVAITHD RSFLDRVATR IIELDRGILR SYEGNYARYQ ILKEEQLAQE AVISAKADRL LAQEEIWIRK GVEARRTRSE SRIVRLENLR ASRKAHREAV GKVKMDVASG GLSGKLVAEL TQASLSFGDK VIIKDFSATI LRGDKIGLLG PNGAGKTTLL KLILGELVPD SGKIRQGTNL QVAYFDQMRN ALDLDATLVD FISPGSEWIE IGNQRKHVKS YLGDFLFSPA RANSPVRSLS GGERNRLLLA RLFARPANVL VLDEPTNDLD IETLELLEEL LQNYAGTVFL VSHDRTFLDN VVTSTIAFEG DGLWREYEGG VQDWLLQSKR SKEIQNATIS IAVNAQQTGA RGQKNTKSSD NTKTVTAQKL SNKAQREVDT LQARIDVLEQ EQAALRATLT DANLYAKDPA RATELYARDA AIDAELLAAL TRWEELSAI
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