| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0626 |
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| Symbol | tgt |
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| ID | 3963906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 648806 |
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| End bp | 650023 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637915456 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_521908 |
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| Protein GI | 89899437 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCCAAT TTGACCTGCT CCAAACCGAC CCCTCCAGCC ATGCCCGCCG TGGCCGCCTG
ACCCTGAACC ATGGCGTGGT GCAAACGCCC ATTTTCATGC CGGTGGGCAC CTACGGCACG
GTGAAAGGTG TCACACCGCG CAGCCTGGAA GACATGGACG CGCAAATCAT CCTGGGCAAC
ACCTTTCACC TGTGGATGCG CCCGGGGCTG GATGTGATGG CGCAGTTTGG CGGCCTGCAT
CAGTTTGAAA AATGGAACAA ACCGATCCTG ACCGACTCCG GCGGCTTTCA GGTCTGGAGC
CTGGGGGCCA TGCGCAAAAT CACCGAGGAC GGCGTGCACT TCTCCAGCCC GGTCAATGGC
GACAAGCTGT TCATGTCGCC CGAGGTCAGC ATCCAGATTC AAACCACGCT CAACTCCGAC
ATTGCGATGC AGTTGGACGA ATGCACGCCT TACTTGTCGG TCGAGCCCAA AACCAAAGGC
CAGATCACCA CCGAGGACGA GGCCAGAGCC TCGATGGAAA TGAGCCTGCG CTGGGCCCAA
CGCAGCCGGG CTGAATTTGC CCGGCTGGAG AACCCCAACG CCCTGTTCGG CATTGTGCAA
GGCGGCATGT TTGAGGGTTT GCGGCAAGAG TCGCTGGAGC AGCTGGTGGC CATGGACTTT
CCCGGCTACG CGGTCGGCGG GGTCAGTGTC GGCGAGCCCA AAGATGAGAT GCTGCGCATC
ATGGCGCACA CACCGCACCG TTTGCCGGCG CACAAACCGC GCTACCTGAT GGGTGTCGGC
ACGCCCGAGG ATCTGATCGA GGGCGTGGCC CAAGGCGTGG ACATGTTTGA CTGCGTCATG
CCGACCCGCA ACGCGCGCAA CGGCACATTT TTTACCCGCT ATGGCGATTT GAAAATCCGC
AATGCCCGCC ACAAAATGGA CCAGCGCCCG CTGGATGAAA CCTGCACCTG TTACGCCTGC
GCGGGCAGCG CCACGCACGC GAACACGCCA GACACGGGTG CAGGCCGCTC CTGGGCCCAA
GGCGGGCGGG GTGGATTTAG CCGCGCCTAC CTGCACCACC TGGACCGCTG CGGCGAGATG
CTGGGGCCCA TGCTGTCGAG CATCCACAAC CTGCACTACT ACCTGAACCT GATGACGGAG
GTGCGCGCTG CGCTGGACGC CGGCACCTTT GGCGCGTTCC GCCAGCAGTT CAAGGCCAAT
CGGGCGCGCG GGGTGTGA
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| Protein sequence | MLQFDLLQTD PSSHARRGRL TLNHGVVQTP IFMPVGTYGT VKGVTPRSLE DMDAQIILGN
TFHLWMRPGL DVMAQFGGLH QFEKWNKPIL TDSGGFQVWS LGAMRKITED GVHFSSPVNG
DKLFMSPEVS IQIQTTLNSD IAMQLDECTP YLSVEPKTKG QITTEDEARA SMEMSLRWAQ
RSRAEFARLE NPNALFGIVQ GGMFEGLRQE SLEQLVAMDF PGYAVGGVSV GEPKDEMLRI
MAHTPHRLPA HKPRYLMGVG TPEDLIEGVA QGVDMFDCVM PTRNARNGTF FTRYGDLKIR
NARHKMDQRP LDETCTCYAC AGSATHANTP DTGAGRSWAQ GGRGGFSRAY LHHLDRCGEM
LGPMLSSIHN LHYYLNLMTE VRAALDAGTF GAFRQQFKAN RARGV
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