Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0584 |
Symbol | |
ID | 3960102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 605575 |
End bp | 606567 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637915414 |
Product | AraC family transcriptional regulator |
Protein accession | YP_521866 |
Protein GI | 89899395 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.154846 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACCTG CCTCTTCTTG CCACACCGAT TCCATGGCCT TTGATGCGCC AATTGTGGGC AACACGCACC AGATTCGCAC GATCGAAGCG TTTGACGCCG ACGAGCACGC GCACAACCTG ACCGATTGGG AACAAAGTTA CGACCAGATC ACGCGTGGCC ATTTCCATGG CGCGCTGGCC GAGTTGCACT TGCCCCAGAT GCAGGTGTTT CGTGAGCGCA CCAGCCAGGC GGTGCGCCAG TCTTGCTGCG TCTGGCCAGA TGCCTTCTGG TTCGGCCTGC CCGAACAGTC AGACCAGACC CGCATCAACG GGCGGCTGGC GGGTGAACAC GCCATCATGG TGCGTCCAGG GGCGTGCGAG TTCGAGCTGG TGACCCCACC CGACTACGCC ATCTACGGCA TCGTGATCCG CCGGGAAGCC CTGTGGCAGG CGGCGGAGCT GAGCGGCTGC CGGATCGACT GGGCGCAACT GACCGGCACT GAGGTGATGC ACGTCGACAG CAGCTCACGT GCGTCCTTGC TGCAGACGCT GTCCGGCTTG CTGCAAGACG GCGGTGGCTG CACCGACCGT GATTTGCGTC AGCAAGTCCT GGTCAACGCC CTGCTCGCCC TGCTGGATAC CCGCGCGGTG GACAGCGCGG TCAGCGGCAG CTTTCAGCGC CGTCAACGCA TCGTGGCCAA GGCGCGTGAT CTGGTGCTGG CGCACCATGA CCAGGCCATC ACCGTGCCGC GGCTGTGTGA ACAGTTGTTT GTCAGTCGGC GCACCTTGCA GTATTGTTTT GAAGATGTGC TGGGCATGAG CCCGATGCAG TACCTGCGCC TGATCCGCCT CAACGGTGCA CGCCGCCATT TGCGGCAAGC CTCATCCAAA TCCCTGACGG TGCAGGACGT GGCGGCAGAC TGGGGCTTCT GGCATTTCAG CCAGTTCTCC AGCGATTACC GAAAGTTGTT TGGGCAGAGT CCGTCGGAAT CGTTGCGCCA GCGTTCACAT TGA
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Protein sequence | MAPASSCHTD SMAFDAPIVG NTHQIRTIEA FDADEHAHNL TDWEQSYDQI TRGHFHGALA ELHLPQMQVF RERTSQAVRQ SCCVWPDAFW FGLPEQSDQT RINGRLAGEH AIMVRPGACE FELVTPPDYA IYGIVIRREA LWQAAELSGC RIDWAQLTGT EVMHVDSSSR ASLLQTLSGL LQDGGGCTDR DLRQQVLVNA LLALLDTRAV DSAVSGSFQR RQRIVAKARD LVLAHHDQAI TVPRLCEQLF VSRRTLQYCF EDVLGMSPMQ YLRLIRLNGA RRHLRQASSK SLTVQDVAAD WGFWHFSQFS SDYRKLFGQS PSESLRQRSH
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