| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0563 |
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| Symbol | |
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| ID | 3960712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 585217 |
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| End bp | 585846 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637915393 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_521845 |
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| Protein GI | 89899374 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCACG TTATTCTTTG CGACGACCAC GCCATGACAC GACGCGGCAT CCGCGACACG
CTGGCGGAGG CGGTTGATAT TCAAGTCACC GCCGAAGCCG GTAGCTATGC TGAAGTTCGC
GAGGCCATGC GCAACGCGAC CTGTGACGTG CTGGTCCTCG ACCTCAATCT GCCGGGCCGA
GGCGGTATGG AGGTTTTGTC CAGCCTGAAA GAAGCCCACT CACCCATCAA GGTGTTGATC
GTCTCCATGT TCCCGGAAGA CCAGTATGCG ATTCGGTGTC TGCGGGCTGG CGCGCAAGGC
TACCTGAACA AGGCCGGCGA CCCGGCCGAC CTGATCAGCG CGGTCCGGAC TGTTGCCCAG
GGAGGCAAGT ACGTCACACC CGCAGTTGCC CACATGCTGG TCGAAAGCCT GAGCATCCCC
GAAAACCAGA CCCTGCATGC CGCATTGTCA GAGCGGGAAC TGCAGACCTT GCTGAAAATT
GCCTCTGGCA AGCGCCTGGC GGACATCGCC GAAGAACTCA TGCTCAGCCC CAAAACCGTC
AGCGTGTACC GCGCCAGGGT GCTGGAAAAA CTCAAACTCT CCAACAACGC CGAACTCACG
GTCTACGCCA TTCGCAACGA GTTGGTCTGA
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| Protein sequence | MIHVILCDDH AMTRRGIRDT LAEAVDIQVT AEAGSYAEVR EAMRNATCDV LVLDLNLPGR
GGMEVLSSLK EAHSPIKVLI VSMFPEDQYA IRCLRAGAQG YLNKAGDPAD LISAVRTVAQ
GGKYVTPAVA HMLVESLSIP ENQTLHAALS ERELQTLLKI ASGKRLADIA EELMLSPKTV
SVYRARVLEK LKLSNNAELT VYAIRNELV
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