| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0558 |
|---|
| Symbol | |
|---|
| ID | 3960746 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 582573 |
|---|
| End bp | 582992 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637915388 |
|---|
| Product | flagellar motor switch FliN |
|---|
| Protein accession | YP_521840 |
|---|
| Protein GI | 89899369 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
|---|
| TIGRFAM ID | [TIGR02480] flagellar motor switch protein FliN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.139719 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATTG ATGAGAAACC AGCAGAAGAT GACGGCATGG CCGATTGGGC TGAGGCCCTG
CTGGAGCAAA AAAGTTCGGA GCCCACCGCA GAACCAGGGG GTGTCCTGGC AGGGGACACG
TCCCATTCTT TTTCCTCATC GGATGCGCCG ATCAGCGATA TCAATCGGGT CCTTGACATT
CCGGTTCAGC TGTCGGTTGA GTTGGGTCGA ACCAAGGTGC CGATCAAGCA TATTCTTCAG
TTAGGGCAAG GCTCGGTGGT GGAGTTGGAT GCCTTGGCCG GTGAGCCGAT GGATGTGTTG
GTGAACGGCT ATTTGATTGC GCAGGGCGAG GTCGTCGTGG TGAATGACAA GTTCGGCATT
CGCCTGACCG ATGTCGTGAC GCCGTCCGAG CGGCTGCGTC GTGTCAGCAA GGGTGGTTGA
|
|---|
| Protein sequence | MAIDEKPAED DGMADWAEAL LEQKSSEPTA EPGGVLAGDT SHSFSSSDAP ISDINRVLDI
PVQLSVELGR TKVPIKHILQ LGQGSVVELD ALAGEPMDVL VNGYLIAQGE VVVVNDKFGI
RLTDVVTPSE RLRRVSKGG
|
|---|
| |