Gene Rfer_0549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0549 
Symbol 
ID3960737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp573900 
End bp574217 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content62% 
IMG OID637915379 
Productflagellar hook-basal body complex protein 
Protein accessionYP_521831 
Protein GI89899360 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTCC GACTCTCCCC CACCACCATG CCGACGACGG TGCGCCCCAC GCTGGCACCA 
CGCCTGTCAT CCAGCCAGGT GACGGGCGGC GCCGACGGCG GCTTCTCCGG CGCACTCAAA
AGCGCCCTCA GTTCGGTCAG CGCGGCGCAA AACGACGCCA CCCGCTTGCA GCGCGAAGTG
CAAATGGAAA ACCCCAATGT CAGCCTGGAA GAAACCATGG TGGCGATCCA AAAAGCGCAA
ATCGGCTTTC AGGCCACGCT GCATGTGCGC AACCGCATGG TGCAGGCCTA TACCGACATC
ATGAACATGC AGGTGTGA
 
Protein sequence
MELRLSPTTM PTTVRPTLAP RLSSSQVTGG ADGGFSGALK SALSSVSAAQ NDATRLQREV 
QMENPNVSLE ETMVAIQKAQ IGFQATLHVR NRMVQAYTDI MNMQV