Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0537 |
Symbol | |
ID | 3963876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 559976 |
End bp | 560656 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637915367 |
Product | methylation |
Protein accession | YP_521819 |
Protein GI | 89899348 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4795] Type II secretory pathway, component PulJ |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCACC CGGGCTTGCC GCGGCTTCGA GTCAAAGGCT TCACGCTGAT TGAGCTGCTG GTGGCGATCA GCCTGATGGC GCTGATGGCG GCCCTGAGCT GGCGCGGGCT CGACGGCATG ACGCGAGCGC AGACGCAAAT GCGCCGGCAT TCAGACGATG TGCTCACCTT GCAGGCGGGC CTGGCGCAGT GGGGCGCTGA CCTGGACGCG CTGGCCACTC AACCCAATAC CCCGAGCCTG GACTGGGACG GGCGCGCCCT GCGCCTCCTG CGCGCCAGCA CCGCGATGCC CGGCGAGGGG CTGCGGGTGG TGGCTTGGTC CCGGCGCACG ATCGACGGGG CCGGTCAGTG GCTGCGCTGG CAGTCGCCGC CCTTGACCAC GCGCGCTCAA TTGCAACTGG CCTGGCAGCA GGCCGCCTTG TGGGGGCAGA ACCCGAGCGA CGAAGCCAGA ACCCGAGAGG TGCGGGTGGC GGCGCTCGAT CAGTGGCAAA TCTTTTATTT TCGGGACAAC GCGTGGAGCA ACCCGCTGTC CAGCGCCGGT GCCTCCGGCG CGGCCCAGGC GGCAACGGCG GCATTGATCC CCGATGGCGT GCGGCTGGAG CTGACGCTGT CGGCCGGCCA AGCCATCAGT GGCCGCGTGA CGCGCGATTG GGTCCGTCCC ACGCTGGGGA GCGGCAAATG A
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Protein sequence | MTHPGLPRLR VKGFTLIELL VAISLMALMA ALSWRGLDGM TRAQTQMRRH SDDVLTLQAG LAQWGADLDA LATQPNTPSL DWDGRALRLL RASTAMPGEG LRVVAWSRRT IDGAGQWLRW QSPPLTTRAQ LQLAWQQAAL WGQNPSDEAR TREVRVAALD QWQIFYFRDN AWSNPLSSAG ASGAAQAATA ALIPDGVRLE LTLSAGQAIS GRVTRDWVRP TLGSGK
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