Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0488 |
Symbol | |
ID | 3964079 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 504569 |
End bp | 505693 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637915319 |
Product | alanine racemase |
Protein accession | YP_521771 |
Protein GI | 89899300 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0787] Alanine racemase |
TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCGCC CGATCCAAGC CACCATTCAC ACCGCTGCCC TGCGCCACAA TCTGGCGCGC GCCCGTCTGG CCGCGCCAGA TGCAAAAGTC TGGGCCATCG TCAAGGCCAA TGCCTACGGC CATGGCATTG AGCGCGTGTT TGAAGGCCTG CGCGCGGCCG ACGGCTTTGC CCTGCTGGAC CTGGACGAAG CGCAGCGCGT GCGGGCGCTG GGCTGGCGTG GACCGATCCT TTTGTTGGAG GGTGTGTTCG AGTTGCGCGA CCTGGAGCTG TGCTCGCGCC TGGACCTGTG GCACACCGTG CACTGCGACG AGCAGATCGA CATGCTGGCC AGCCACAAGA CCAAGGTGGC GCAACGGGTG TTCCTGAAAA TGAATTCCGG CATGAACCGG CTCGGCTTTA CGCCGCAACG CTACCGCGCC GCCTGGACGC GTCTGAATGC CCTGCCGCAG GTTGATGAAA TTTCCCTGAT CACGCATTTC AGCGACGCCG ATGGCGCGCG CGGCATCACC GAGCAGATGG CGGTGTTTGC CGAAGTCACG CGCGACCTGC CGGGCGAGCG CACCTTGAGC AACAGCGCGG CCACCCTGCT TCACACGCCC GCCAGGCAGC CGGGCGACGG CTTCGTCGCC TCCGACTGGG TGCGCCCCGG CATAGCCATT TATGGCAGCG CGCCGGACTT TCCCCAGCAC AGCGCCACTG ACTGGGGGCT GCAGCCCAGC ATGACACTTA CTGCAAAAAT AATAGCTACT CAAACAGTGG ATACGGGGGC TAGCGTCGGA TATGGCTCAA CATTTGTGGC CGACAAGCCG ATCCAGGTCG GTGTCGTCGC CTGCGGCTAT GCCGACGGCT ACCCGCGCCT GTGCCCCACG GGCACGCCGG TGCTGGTGAA CGGGATTCGC ACGCGCACCG TGGGCCGCGT GAGCATGGAC ATGCTCGCCG TCGACCTGAG TGCCGTGACG GCAGCCGGTG GCCAGGTTGG GATCGGCAGC GAGGTCACCC TGTGGGGGCG TGCCGCCAAT GGCCTGGTGC TGGGGATCGA CGAGGTGGCG CAGCCGGCCG GGACGGTGGG CTACGAACTG ATGTGCGCAC TGGCGCCGCG AGTCCCCGTG CTGGTCGCAG ACTGA
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Protein sequence | MPRPIQATIH TAALRHNLAR ARLAAPDAKV WAIVKANAYG HGIERVFEGL RAADGFALLD LDEAQRVRAL GWRGPILLLE GVFELRDLEL CSRLDLWHTV HCDEQIDMLA SHKTKVAQRV FLKMNSGMNR LGFTPQRYRA AWTRLNALPQ VDEISLITHF SDADGARGIT EQMAVFAEVT RDLPGERTLS NSAATLLHTP ARQPGDGFVA SDWVRPGIAI YGSAPDFPQH SATDWGLQPS MTLTAKIIAT QTVDTGASVG YGSTFVADKP IQVGVVACGY ADGYPRLCPT GTPVLVNGIR TRTVGRVSMD MLAVDLSAVT AAGGQVGIGS EVTLWGRAAN GLVLGIDEVA QPAGTVGYEL MCALAPRVPV LVAD
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