Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0483 |
Symbol | |
ID | 3963802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 500120 |
End bp | 501019 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637915314 |
Product | lytic transglycosylase, catalytic |
Protein accession | YP_521766 |
Protein GI | 89899295 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACGCCT TGGTCCGATG CCGCCGTCCG CTGTTGATCG CCCTTTTGGG TCTCGCCCTT GCCTTGCCGG TGCTGGCCCA AAACAGCACC CCGGATGCCC GCGCTATCGA CTTGCGCCAG CAGGCCATCG CCTACGAGAA CGGTGAAGGT GTGCCGCGCA ACCCAGCGCT GGCGATTTCC CTGTACTGCC AGGCCGCTGC TCTGGGCGAC GCCCAAGCCC ACTACAGCCT GGGCTGGATC TACGCCAACG GGCGCGGCGT GCCACGCGAC GACGCTATGG CGGCCTACTT TTTCCAGGCC GCTGCCGCGC AGGGGCTGGA AGCCGCCCAA CGGATGCTGA AAATCGTGGG GGAACCGACC CCCGACGTGC CCGAGTGCCT GCGTCCGCCG GCGCCGCCGC CAGCGTCGGC GACCGACCTG GTGCCGGAGC CGGGTGTGGA CTACCAAGCG ATTGCGCCGC GCAAGATTTT TGAGCTGGTG ATGAAAATGG CGCCCCAGTA CCAGGTGCAG CCGCAACTGG CGCTGGCCAT CATCGCCGCC GAATCGAATT TCGACAGCCA GGCGCTGTCG CCCATGAACG CCCAGGGCCT GATGCAGCTG ATCCCCGAGA CCAGCCAGCG CTTTCAGGTG CGCAACCCGT TTGACGCGGC GCAGAACATC CGCGGTGGCC TGGCCTACCT GCGCTGGTTG CTGGCCTATT TTGAGGGCGA CATTGTCTTG GTGGCCGCCG CCTACAACGC GGGCGAGGGC AAGGTGGAGC GTTACCGTGG CGTGCCGCCG TACCAGGAAA CCCGCGCCTA CGTGCAGCGC ATCGTGCGCG CGGTGGGCAC GCTGGCGCAC CCGTTTGACG CCCGCGTGAC CCCGCCCTCG CCCGCGCTGG CCCTGATCCG GCTTAACTGA
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Protein sequence | MHALVRCRRP LLIALLGLAL ALPVLAQNST PDARAIDLRQ QAIAYENGEG VPRNPALAIS LYCQAAALGD AQAHYSLGWI YANGRGVPRD DAMAAYFFQA AAAQGLEAAQ RMLKIVGEPT PDVPECLRPP APPPASATDL VPEPGVDYQA IAPRKIFELV MKMAPQYQVQ PQLALAIIAA ESNFDSQALS PMNAQGLMQL IPETSQRFQV RNPFDAAQNI RGGLAYLRWL LAYFEGDIVL VAAAYNAGEG KVERYRGVPP YQETRAYVQR IVRAVGTLAH PFDARVTPPS PALALIRLN
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