| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0440 |
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| Symbol | |
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| ID | 3962852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 446021 |
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| End bp | 447088 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637915271 |
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| Product | tartrate dehydrogenase |
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| Protein accession | YP_521723 |
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| Protein GI | 89899252 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACTT ACGAAATAGC TTGCATCCCG GGCGACGGAA TCGGAAAAGA AATCGTGCCC
GCCGGCCAGA CCGTGCTGGC GGCACTGGCC GCCAGCCGCA ACACGTTCAA GTTTGAGTTT
GAGAACTTCG GCTGGGGCGG CGACTGGTAC CGCAGGCACG GCGAGATGAT GCCGGCGAAC
GGCCTGGACG CCCTGCGCAA CAAAGATGCA ATTCTGTTTG GTTCCGCGGG TGACCCGGAC
ATCCTCGATC ACATCACACT CTGGGGCCTG CGCCTCAAAA TTTGCCAGGG ATTTGACCAG
TACGCCAACG TGCGCCCAAC CCGCATCTTG CCCGGCATCG ACGCGCCGCT CAAGCGCTGC
ACGCCTGAAG ACCTGAACTG GGTCATCGTG CGCGAGAACT CCGAGGGCGA ATATGCTGGC
GTCGGCGGCC GCGTCCACCA GGGACACCCG CTTGAAGTGG CCACCGACTT GTCGGTGATG
ACCCGCGCCG GTGTCGAGCG CATCATGCGC TACGCCTTCA AGCTGGCTCA GTCCCGTCCG
CGCAAGCTGC TGACGGTGGT GACCAAGTCC AACGCCCAAC GCCATGCGAT GGTGATGTGG
GACGAGATCG CGGCGCAAAT TTCGAAAGAG TTCCCTGATG TGAAATGGGA TAAAGAGCTG
GTGGACGCCG CCACAGCGCG CATGGTCAAC CGCCCGGCGA CGCTTGACAC CCTGGTTGCG
ACCAATTTGC ATGCCGACAT CCTGAGCGAC TTGGCAGCTG CGCTGGCGGG TAGCTTGGGC
ATCGCACCGA CCGGCAACAT CGACCCCGAG CGCCGCTATC CCAGCATGTT TGAACCGATC
CATGGCTCGG CCTTCGACAT CATGGGCAAA GGCCTGGCGA ATCCTGTAGG CACGTTCTGG
AGCTGCGTGA TGCTGCTGGA GCATCTGGGT GAGGAGGCTG CAGCGGCACA GCTGATGGCT
GTCATTGAAC AAGTGACCGC TGACCCTGCA CTGCACACGC GCGACCTGGG CGGCAGTGCC
ACGACGGCCG AAGTGACGCA GGCCGTCTGT GCCCGCATCG CGGCCTGA
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| Protein sequence | MKTYEIACIP GDGIGKEIVP AGQTVLAALA ASRNTFKFEF ENFGWGGDWY RRHGEMMPAN
GLDALRNKDA ILFGSAGDPD ILDHITLWGL RLKICQGFDQ YANVRPTRIL PGIDAPLKRC
TPEDLNWVIV RENSEGEYAG VGGRVHQGHP LEVATDLSVM TRAGVERIMR YAFKLAQSRP
RKLLTVVTKS NAQRHAMVMW DEIAAQISKE FPDVKWDKEL VDAATARMVN RPATLDTLVA
TNLHADILSD LAAALAGSLG IAPTGNIDPE RRYPSMFEPI HGSAFDIMGK GLANPVGTFW
SCVMLLEHLG EEAAAAQLMA VIEQVTADPA LHTRDLGGSA TTAEVTQAVC ARIAA
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