| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0438 |
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| Symbol | |
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| ID | 3962850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 443711 |
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| End bp | 444706 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637915269 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_521721 |
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| Protein GI | 89899250 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.681459 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTCAAA AAGCATTTAT CTTTAACTTG CATACGAAAA GAGACATCAT GAAAAAGCTA
CCACCACTGT TCCAGTTTGC GCTGTTGGCA ATACCCCTGA CCCTGGCCGT TCAAATGAAC
GCCACTGCGA AGGACGTCAA AGATCTGAGG ATCGCGGTCA TCCCGAAGGT TGCTGTGCCA
TTCTTCGACG ACTGCAACAA TGGCGCCAAG GCCGCTGCCG ATAAGCTCGG CGTGCAGTAT
CAATGGGTTG TGCCACAGAA TACGCAGGGT TCAACTCAAG TTCGCATCCT CGAAGACCTG
ATCTCCAAGA AGGTGGATGG CATCGCCATC TCGGTCAACG AACCGAAGTC GGTCGAGGCT
GCGATCAAGA AGGCTGTCGC CAGCGGCATC AAGGTCGTGA CGTTCGACTC GGATTCGGCC
AACAGCGGTC GTTCGATGTA CATCGGCACC ATCAATTCGG CCGCAGGCGA GACGATGGGC
GAGTCGATGG CCAAGGCCAT CGATGGCGAA GGTGAGGTGG CCATTCTCAC CGGTCAGCTT
GGCGCTGCGA ACCTCAACGA GCGTATCACC GGCATCAAGA AGTCGCTGTC CAAGTACCCG
AAGATCAAGG TCGTGGCGAC CGAGGGCACG GAGGATGATT TGGCCAAGGC GGTTTCAACG
ACCGAATCCC TCTTCCGCGG ACATCCAGCA CTCAAGGGCA TCTTCGGTGT GAGCCAGGTC
GGCGGACCCG CAGTGTCCAA GGTCATGGCT ACCAAAGAGT TTGGCAGCAA GAAAGGTGCT
GTGAAAGTCT TTGCATTCGA CGACCTGCCT GACACGGTCA AGGGTGTGAA GGAAGGCTAC
ATCCAGGGGA TCATGGTTCA GCGCCCCGTC ACGATGGGCA AGCTTGCTGT CGAGCACCTG
GTCGATCAGA TCACCGGCAA AGAGCCAGCA CCGAAGGACG TCGATACGGG GGTGAACGTG
GTCACCAGCC AAAACCTCGG CTCCTATACC AAGTAA
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| Protein sequence | MLQKAFIFNL HTKRDIMKKL PPLFQFALLA IPLTLAVQMN ATAKDVKDLR IAVIPKVAVP
FFDDCNNGAK AAADKLGVQY QWVVPQNTQG STQVRILEDL ISKKVDGIAI SVNEPKSVEA
AIKKAVASGI KVVTFDSDSA NSGRSMYIGT INSAAGETMG ESMAKAIDGE GEVAILTGQL
GAANLNERIT GIKKSLSKYP KIKVVATEGT EDDLAKAVST TESLFRGHPA LKGIFGVSQV
GGPAVSKVMA TKEFGSKKGA VKVFAFDDLP DTVKGVKEGY IQGIMVQRPV TMGKLAVEHL
VDQITGKEPA PKDVDTGVNV VTSQNLGSYT K
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