Gene Rfer_0400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0400 
Symbol 
ID3961614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand+ 
Start bp406565 
End bp407182 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content62% 
IMG OID637915233 
ProductTetR family transcriptional regulator 
Protein accessionYP_521685 
Protein GI89899214 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCCCG ACAACGCCGT CAGAACCTCG TTCAAGCAGC AAATGCTCCA GGCCCGCGAA 
GAGGCCATTA TTCAAACCGC GAATCGGCTG CTGGCTGAAA AAGGCTTTGA AGCCATGACG 
GTCGATGAGG TGGCGCTCCA GGCGGGTATT GCCAAAGCCA GCCTTTACAA ACACTTTGCC 
AGCAAGGAAG AGCTGGCGGC GGCGGCGACG GCGCGGGTGA TGCGCCGGGC GCGGGATTTC 
ATCCGTGCGC TGCCGGAGCA AGCGCCGCCG CTGGACAAGC TGCGTGCCGT GCTGCGATGG 
ACGCTGGAAG TCAAATTGGC GGGCGATATG CCGTCCTTGC CCAGCCGGAA CTCCACGTTG 
CGTACCGCGC TGATTGGCAA CCAAGACTGC ATGGAGGGTT GGATGGAAGT GAGTGACCGC 
CTGCGCGCAT GGATCGAGGC CGCGCAAGCC GCCGGGGCAC TCAACCCGGC GCTGCCTGCG 
GTTGCCGTTT TGTACACCTT CTTTGCCCGC GCCTGCGATC CGGCGCTGGA GTTTCTGAGG 
ATCGGTGGCC GCTACCAGGA TGAGCAAATC GTGACCCTGG TGCTCAGCAC CTGCTTTGAG 
GGTCTAAATG CCCGCTAG
 
Protein sequence
MNPDNAVRTS FKQQMLQARE EAIIQTANRL LAEKGFEAMT VDEVALQAGI AKASLYKHFA 
SKEELAAAAT ARVMRRARDF IRALPEQAPP LDKLRAVLRW TLEVKLAGDM PSLPSRNSTL 
RTALIGNQDC MEGWMEVSDR LRAWIEAAQA AGALNPALPA VAVLYTFFAR ACDPALEFLR 
IGGRYQDEQI VTLVLSTCFE GLNAR