Gene Rfer_0358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0358 
Symbol 
ID3962485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp359352 
End bp360584 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content62% 
IMG OID637915190 
Productmajor facilitator transporter 
Protein accessionYP_521643 
Protein GI89899172 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTGA AAATTCTCTT CACGACGCGA GTCGTCCGCC TTTTTTGCTA CGGCTTCCTG 
TCTCTCCTCT TGGCGCTTTA TCTTGCGCAA GTCGGGCTGA CGGACCCGCA AATCGGTTTG
CTGTTCTCGC TCACGCTGGC GGGCGACGCC GCCGTTTCAC TTTGGCTGAC CACGTCCGCG
GACCGGTTCG GCAGGCGGCG CACGTTGCAG ATAGGCGCGC TGCTGATGCT GGGCGCGGGA
CTTGTGTTCA TTCTGACGGA TAACATTGTC TTGCTGATGG CTGCGGCCAT CGTCGGTGTC
ATCAGCCCGA GCGGGAACGA GATCGGGCCT TTTCTGCCGG TCGAACAGGC CGGGCTGAGC
CAGATCGTCC CGAGCCAGAA GCGCACGCAG GTCTTCGCCT GGTACAACCT GGCGGGCTCC
TTTGCGACCG CGATGGGTGC GCTCTGCGGG GGCTGGGTGG TGCAGATTTT GCAGGGCCGG
GGCTGGCTCG CGCTGGACGC GTACAGAGTG GTGCTGGGCG CTTACGCCGC CGGTGGCCTG
GTTTTGACGC TGCTTTTTCT GACCCTGTCG CCAGCCGTTG AAGTGCAGGA GAGAGCCCCG
GTCGGGACCC GGCTTGTCTT GGGGTTACAC CGCTCGCGCG CCGTGGTGCT GCGCTTGTCG
GCCTTGTTCG CGCTTGATGC CTTCGCGGGC GGCCTGATCC TGCAAAGCAT GATCGCCTAT
TGGTTCCACA TCAAGTTTGG TGTGGACACC GGCCTGTTGG GAAGCCTCTT TTTTGGTGCC
AATGTTCTGG CCGGAATCTC GGCTTTGCTG GCGGTGCCCC TGGCAAAGCG CTTTGGATTG
ATCAACACCA TGGTTTTCAC CCATGTTCCC TCCAACCTGT TGCTGATCCT GGTTCCCTTG
ATGCCGAACC TGCCCTTGGC CATCGGCCTG CTGCTGGCGC GTTTCAGCAT TTCGCAGATG
GATGTGCCGA CCCGGCAGTC GTACACCATG GCCGTTGTTT CGGCCGATGA GCGCTCGGCG
GCCGCGGGTG TGACGGGCAT CGCGCGCTCG GTCGGCGCAT CGCTTGCGCC CGTGTTGACA
GGCATCTTCC TGACCAATCC CGCCCTGTTC AGCCTGCCCT TCTTTCTCTG CGGCGGCCTC
AAGCTCGTGT ATGACCTGGC GCTTTATCGA AGTTTTAAGG CGGTCAAACC GCCGGAAGAA
ACTCTGTCCC AAAGCGGGGC CAAGTTTCCT TGA
 
Protein sequence
MDLKILFTTR VVRLFCYGFL SLLLALYLAQ VGLTDPQIGL LFSLTLAGDA AVSLWLTTSA 
DRFGRRRTLQ IGALLMLGAG LVFILTDNIV LLMAAAIVGV ISPSGNEIGP FLPVEQAGLS
QIVPSQKRTQ VFAWYNLAGS FATAMGALCG GWVVQILQGR GWLALDAYRV VLGAYAAGGL
VLTLLFLTLS PAVEVQERAP VGTRLVLGLH RSRAVVLRLS ALFALDAFAG GLILQSMIAY
WFHIKFGVDT GLLGSLFFGA NVLAGISALL AVPLAKRFGL INTMVFTHVP SNLLLILVPL
MPNLPLAIGL LLARFSISQM DVPTRQSYTM AVVSADERSA AAGVTGIARS VGASLAPVLT
GIFLTNPALF SLPFFLCGGL KLVYDLALYR SFKAVKPPEE TLSQSGAKFP