Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0358 |
Symbol | |
ID | 3962485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 359352 |
End bp | 360584 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637915190 |
Product | major facilitator transporter |
Protein accession | YP_521643 |
Protein GI | 89899172 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTGA AAATTCTCTT CACGACGCGA GTCGTCCGCC TTTTTTGCTA CGGCTTCCTG TCTCTCCTCT TGGCGCTTTA TCTTGCGCAA GTCGGGCTGA CGGACCCGCA AATCGGTTTG CTGTTCTCGC TCACGCTGGC GGGCGACGCC GCCGTTTCAC TTTGGCTGAC CACGTCCGCG GACCGGTTCG GCAGGCGGCG CACGTTGCAG ATAGGCGCGC TGCTGATGCT GGGCGCGGGA CTTGTGTTCA TTCTGACGGA TAACATTGTC TTGCTGATGG CTGCGGCCAT CGTCGGTGTC ATCAGCCCGA GCGGGAACGA GATCGGGCCT TTTCTGCCGG TCGAACAGGC CGGGCTGAGC CAGATCGTCC CGAGCCAGAA GCGCACGCAG GTCTTCGCCT GGTACAACCT GGCGGGCTCC TTTGCGACCG CGATGGGTGC GCTCTGCGGG GGCTGGGTGG TGCAGATTTT GCAGGGCCGG GGCTGGCTCG CGCTGGACGC GTACAGAGTG GTGCTGGGCG CTTACGCCGC CGGTGGCCTG GTTTTGACGC TGCTTTTTCT GACCCTGTCG CCAGCCGTTG AAGTGCAGGA GAGAGCCCCG GTCGGGACCC GGCTTGTCTT GGGGTTACAC CGCTCGCGCG CCGTGGTGCT GCGCTTGTCG GCCTTGTTCG CGCTTGATGC CTTCGCGGGC GGCCTGATCC TGCAAAGCAT GATCGCCTAT TGGTTCCACA TCAAGTTTGG TGTGGACACC GGCCTGTTGG GAAGCCTCTT TTTTGGTGCC AATGTTCTGG CCGGAATCTC GGCTTTGCTG GCGGTGCCCC TGGCAAAGCG CTTTGGATTG ATCAACACCA TGGTTTTCAC CCATGTTCCC TCCAACCTGT TGCTGATCCT GGTTCCCTTG ATGCCGAACC TGCCCTTGGC CATCGGCCTG CTGCTGGCGC GTTTCAGCAT TTCGCAGATG GATGTGCCGA CCCGGCAGTC GTACACCATG GCCGTTGTTT CGGCCGATGA GCGCTCGGCG GCCGCGGGTG TGACGGGCAT CGCGCGCTCG GTCGGCGCAT CGCTTGCGCC CGTGTTGACA GGCATCTTCC TGACCAATCC CGCCCTGTTC AGCCTGCCCT TCTTTCTCTG CGGCGGCCTC AAGCTCGTGT ATGACCTGGC GCTTTATCGA AGTTTTAAGG CGGTCAAACC GCCGGAAGAA ACTCTGTCCC AAAGCGGGGC CAAGTTTCCT TGA
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Protein sequence | MDLKILFTTR VVRLFCYGFL SLLLALYLAQ VGLTDPQIGL LFSLTLAGDA AVSLWLTTSA DRFGRRRTLQ IGALLMLGAG LVFILTDNIV LLMAAAIVGV ISPSGNEIGP FLPVEQAGLS QIVPSQKRTQ VFAWYNLAGS FATAMGALCG GWVVQILQGR GWLALDAYRV VLGAYAAGGL VLTLLFLTLS PAVEVQERAP VGTRLVLGLH RSRAVVLRLS ALFALDAFAG GLILQSMIAY WFHIKFGVDT GLLGSLFFGA NVLAGISALL AVPLAKRFGL INTMVFTHVP SNLLLILVPL MPNLPLAIGL LLARFSISQM DVPTRQSYTM AVVSADERSA AAGVTGIARS VGASLAPVLT GIFLTNPALF SLPFFLCGGL KLVYDLALYR SFKAVKPPEE TLSQSGAKFP
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