| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0277 |
|---|
| Symbol | |
|---|
| ID | 3962138 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 281882 |
|---|
| End bp | 282772 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637915112 |
|---|
| Product | NmrA-like |
|---|
| Protein accession | YP_521565 |
|---|
| Protein GI | 89899094 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.022363 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTTCCA CCTTGCTCGT CACCGGCGCA TCCGGTCACC TGGGCCAACG CGTGATTCAT
CACCTGCTGG AGACGCTGAA AGTGGCCCCG CAACGCATCA TCGCCACCAC CCGCAAGCCC
GAAACCCTCA AAGACCTGGC TGCCAAGGGC ATCACCGTGC GCGGCGCCGA CTTTGACGAC
GCAGCCTCGC TGCGCAGTGC TTTTGCGGGG GCGGATCGCC TGCTGCTTAT CAGCACCGAC
GCGCTGGACC GCCCCGGCCG CCGCTTGGCG CAGCAGCAAG CCGCCGTCGC TGCAGCGCAG
CAAGCCGGTG TGGCGCATGT GGTCTACACC TCCATGCCGC TGCCTGAAAA TTCGCCCCTG
TTGATTGCTC CTGACCACGC CGGCACCGAG AAAGCGCTGG CCAGCAGCGC GCTCAAGGGC
TGGACGCTGC TGCGCAACCA CTGGTATTTT GAAAACCTGT TCATGTGGCT GCCGTCAGCC
TTGGCCAGCG GCCAGTGGTA CAGCGCGGCC GAGCAAGGCA AGGTGGCCCA CATCGCGCGC
GACGACCTGG CACGTGCTGC TGCCGCCGCA TTGCTCAAAG ACACCGGCAA GAACACCTAC
ACCCTGAGCG GCGCCGAGGC ATTCACCACC GAGCAAATCG CCCAACAGGT GTCGCAAGCC
ACGGGCAAAC CGCTGCAAGT GGTGCCTGTG CCGCTGGCGG GCCTGATTCA GGGCATGGTG
AGCGCGGGCT TCCCCGAGCC ACTGGCGGCA GTGTTTGCCT CGTTCGACAC CAACACCGCC
GCAGGCCGCG TGGCCGAGGT CACGGGTGAC TTCCAGAAGC TCACCGGAGT TGCGCCGCAG
CCATTTGCCG GCTGGTTAAG CGCCAACGCC GCTGCATTGG CTGCGTTATA A
|
|---|
| Protein sequence | MTSTLLVTGA SGHLGQRVIH HLLETLKVAP QRIIATTRKP ETLKDLAAKG ITVRGADFDD
AASLRSAFAG ADRLLLISTD ALDRPGRRLA QQQAAVAAAQ QAGVAHVVYT SMPLPENSPL
LIAPDHAGTE KALASSALKG WTLLRNHWYF ENLFMWLPSA LASGQWYSAA EQGKVAHIAR
DDLARAAAAA LLKDTGKNTY TLSGAEAFTT EQIAQQVSQA TGKPLQVVPV PLAGLIQGMV
SAGFPEPLAA VFASFDTNTA AGRVAEVTGD FQKLTGVAPQ PFAGWLSANA AALAAL
|
|---|
| |