| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0220 |
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| Symbol | |
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| ID | 3960126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 218122 |
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| End bp | 219849 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637915055 |
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| Product | benzoyl-CoA-dihydrodiol lyase |
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| Protein accession | YP_521508 |
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| Protein GI | 89899037 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
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| TIGRFAM ID | [TIGR03222] benzoyl-CoA-dihydrodiol lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.205685 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACTATG ATGCGTGCAC TGATGTCGAT AAATGCATTT TTATGCTTCT AACCCGAGGA
GAACAGAACG TGAGCACCCC CAGCCGTGTC GAATACCAAA TCACCCCGTC CCAGTACAAA
CACTGGAAAC TGGAGTTCAA TGGCCCAGTG GCCACATTAA AAGCCGACTT TGACGAAAAC
GCCGGCCTGC GCCCCGGCTA CAAACTCAAG CTCAACAGCT ACGACCTGGG CGTGGACATT
GAACTCAACG ATGCCATCAG CCGCATCCGC TTTGAACACC CTGAAGTGCG CACCGTGGTG
GTCACCTCGG CCCGCGACCG GGTGTTTTGC TCCGGTGCCA ATATCTTCAT GCTCGGCGTC
AGCAGCCACG CCTGGAAGGT GAATTTCTGC AAATTCACCA ACGAGACCCG CAACGGGCTG
GAAGACTCTT CGGCCCACAG CGGCCTGAAG TTTCTTGCTG CCGTCAATGG TGCCTGTGCC
GGAGGTGGCT ACGAGCTGGC CCTGGCCTGC GACGAAATCA TTTTGGTGGA CGACCGCTCC
AGCGCGGTGA GCCTGCCTGA GGTGCCTCTG CTGGGCGTGT TGCCCGGCAC TGGTGGCCTG
ACCCGCATCA CCGACAAACG CCATGTGCGC CATGACCTGG CTGACCTGTT CTGCACCAGC
GCCGAAGGTG TGCGCGGCGA CAAGGCCGTG GCCTGGCGTC TGGTGGATGC GGTGGCCAAA
CCCGCCGTGT TTGCCCAGAA AGTGCAAGAA CGCGCCCTGG CACTGGCCGC CCAGAGCGAC
CGCCCGGCGG ATGCCAAGGG CGTGGCCCTG ACGCCGTTAG AGCGCAGCAT CGAGGCCGAT
GCGCTGCGTT ACACACATGT CACCGTCGAG ATTGACCGTG CCAAGCGCAC CGCCACCTTC
ACCGTCAAGG CACCGACTGG CGTGCAGCCA AGCGACATCG CCGGCATCGA AGCCGCTGGT
GCCGCCTGGT ACCCGCTGGC CATGGCGCGT GAGCTGGAAG ACGCCATCCT GAATATGCGC
ACCAACGAAA CCGAAATCGG CACCTGGCTG ATCAAGACCG AAGGTGAAGC GAAAGCCGTG
CTGGCAATGG ATGCTACCTT GCTGGCGCAC AAAAACCACT GGCTGGTGCG CGAAACCCTT
GGCCTGCTGC GCCGCACCTT CAGTCGCCTG GACGTGTCCT CGCGCAGCCT GTTTGCGCTG
ATTGAAGCGG GCTCCTGCTT TGCCGGTACC CTGCTGGAGC TGGCCTTGGC CTGTGACCGC
AGCTACCAGT TGGTGTTGCC CAATGACGAA GCCAGCACAC CGCGCATCAC GGTGACCGAG
ACCAACTTTG GCTTGTACCC CATGGCCACG ACCCAGAGCC GCCTGGGCCG CCGTTTCTAC
GACGAGCAGT CCGCGCTGGA CTCGGTACGC GCCAGGATCG GTGAAGCGCT GGATGCCGAT
GCCGCCTTCG CACTCGGTTT GGTGACCTCC AACCCCGACG ACATCGACTG GGCCGACGAG
GTGCGCATTG CCATTGAAGA GCGCGTGTCC ATGTCGCCTG ATTCGCTGAC CGGCCTGGAA
GCCAACCTGC GTTTCAACGG CCAGGAGAAC ATGAGCACCC GCATTTTTGG CCGCCTGACC
GCCTGGCAGA ACTGGATCTT CCAGCGCCCC AACGCCGTGG GAGAAAAAGG TGCGCTCAAG
GTTTATGGCA AGGGTGACAA GGCGGCTTTT GACTGGAATC GGGTCTGA
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| Protein sequence | MHYDACTDVD KCIFMLLTRG EQNVSTPSRV EYQITPSQYK HWKLEFNGPV ATLKADFDEN
AGLRPGYKLK LNSYDLGVDI ELNDAISRIR FEHPEVRTVV VTSARDRVFC SGANIFMLGV
SSHAWKVNFC KFTNETRNGL EDSSAHSGLK FLAAVNGACA GGGYELALAC DEIILVDDRS
SAVSLPEVPL LGVLPGTGGL TRITDKRHVR HDLADLFCTS AEGVRGDKAV AWRLVDAVAK
PAVFAQKVQE RALALAAQSD RPADAKGVAL TPLERSIEAD ALRYTHVTVE IDRAKRTATF
TVKAPTGVQP SDIAGIEAAG AAWYPLAMAR ELEDAILNMR TNETEIGTWL IKTEGEAKAV
LAMDATLLAH KNHWLVRETL GLLRRTFSRL DVSSRSLFAL IEAGSCFAGT LLELALACDR
SYQLVLPNDE ASTPRITVTE TNFGLYPMAT TQSRLGRRFY DEQSALDSVR ARIGEALDAD
AAFALGLVTS NPDDIDWADE VRIAIEERVS MSPDSLTGLE ANLRFNGQEN MSTRIFGRLT
AWQNWIFQRP NAVGEKGALK VYGKGDKAAF DWNRV
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