| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0196 |
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| Symbol | |
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| ID | 3960179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 194300 |
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| End bp | 195514 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637915031 |
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| Product | phosphoribosylaminoimidazole carboxylase ATPase subunit |
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| Protein accession | YP_521485 |
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| Protein GI | 89899014 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0026] Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) |
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| TIGRFAM ID | [TIGR01161] phosphoribosylaminoimidazole carboxylase, PurK protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGGCA AGACCATTCT GCCCGGCACA ACAGGCACGG CCGCAACCGC CGGCAGCGGC
CAGCAGACGA CGCTTGGCGT CATGGGTGGC GGCCAATTGG GCCGCATGTT TGTGCAGGCG
GCGCAAGCCA TGGGTTACTT CACCGCGGTG CTCGACCCGG ACGTGATCAG CCCGGCCGGG
CTGGTGAGTC ACTACCATAT TCAGAGCGAC TACCTGGACC AGCAAGGCCT GGCGCAACTG
ATGCAGCGCT GCGCTGCGAT CACCACCGAG TTTGAGAACG TGCCCGCTCC GGCCCTGGTC
ACGCTGGGCG CGCATCGTCC CGTGGCGCCG GGTGCCGAGG CGGTCGGCAT CGCACAGGAC
CGGATCAAGG AGAAAGCGCA TTTTGTGCGC TGTGGCGTGC CGGTAGCACC CTATGCGGTG
ATTGAATCTG CCGCGCAACT GGCGGCGGTG GCCGACGATT TGCTCCCCGG CATCCTCAAG
ACTGCGCGCC TGGGCTACGA CGGCAAGGGC CAGCTGCGCG TCAGCAGCCG GGCCGAGCTG
GCTGCGGCCT GGGATGAACT GAAGAACGTG GCTTGCGTGC TGGAAAAAAT GCTGCCTTTG
CAGGCCGAAT GTTCGGTGAT CGTGGCGCGC GGCTGGGACG GCAGCTGCGT CAACTTCGCG
CCGCAACTCA ACCTGCACCG CGACGGCATT CTGGCAGTCA CCCAGGCTTA TGAAGGAAAT
ATGCCTTCCG CCCTCGTGCA GCAAGCGGTA GAAGCTACCA AATCAATAGC AAATGAATTG
CGGTACGTGG GCGTGCTGTG TGTCGAGTTT TTCTTGCTGC AAGACGACTC AAAAGCGGCG
CAGACGCTGG GCAGCTTGAT CGTGAACGAG ATGGCGCCGC GCCCGCACAA CAGCGGCCAC
TACACGCTGG ACGCCTGCGA CCTGTCGCAG TTTGACCTGC AAGTGCGCAC GCTCACCGGT
TTGCCGCTGC TGCAGCCGCG CCAGCACAGC CCGGCCATCA TGCTCAATTT GCTGGGCGAT
TTGTGGATCG ATGGCGCGTC GCCGCCGTGG GATCAGGTGC TGGCGCTGCC GGGTGCGCAT
CTGCACCTGT ACGGCAAGCT CAAAGCCAGC AAGGGCCGCA AGATGGGGCA CCTGACCTTC
ACCGGCGCCA CCGTGGCCGA AGTGCGCGCC ACGGCGCTGG CGGCAGCCCG GCTGCTGGGC
ATTGAAGCCT TTTGA
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| Protein sequence | MSGKTILPGT TGTAATAGSG QQTTLGVMGG GQLGRMFVQA AQAMGYFTAV LDPDVISPAG
LVSHYHIQSD YLDQQGLAQL MQRCAAITTE FENVPAPALV TLGAHRPVAP GAEAVGIAQD
RIKEKAHFVR CGVPVAPYAV IESAAQLAAV ADDLLPGILK TARLGYDGKG QLRVSSRAEL
AAAWDELKNV ACVLEKMLPL QAECSVIVAR GWDGSCVNFA PQLNLHRDGI LAVTQAYEGN
MPSALVQQAV EATKSIANEL RYVGVLCVEF FLLQDDSKAA QTLGSLIVNE MAPRPHNSGH
YTLDACDLSQ FDLQVRTLTG LPLLQPRQHS PAIMLNLLGD LWIDGASPPW DQVLALPGAH
LHLYGKLKAS KGRKMGHLTF TGATVAEVRA TALAAARLLG IEAF
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