| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0133 |
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| Symbol | |
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| ID | 3960232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 137732 |
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| End bp | 138301 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637914970 |
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| Product | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase |
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| Protein accession | YP_521424 |
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| Protein GI | 89898953 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase |
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| TIGRFAM ID | [TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAAGCGCG TCATCGTCGC CATCTCGGGT GCCAGCGGCG CCGTTTATGG TGTGCGCTTG
TTGCAGATGT TGCGTGGCAT GCAGGGCGTG CAAACCCACT TGACGGTGTC CGAGGCCGGT
TGGCTCAACG TGCAACAGGA GCTGGACATG GCGCGCGCCG AGGTGGAGGC CCTGGCCGAC
GTGGTTTACC CGGTGCAAAA CGTGGGTGCA GCGATTGCCA GCGGCTCGTT TCAATGTGAC
GGCATGGTGG TGGCGCCCTG CGCCATGCGC ACGCTGGCCG CCGTGGCGCT CGGCCTGTCC
GACAACCTGA TCACGCGCGC GGCTGACGTG ATGCTCAAAG AACGGCGCCG TTTGATTTTG
ATGGTGCGTG AAACCCCCCT GAACCTGGCG CACCTGCGCA ACATGACCAG CGTGACCGAG
ATGGGCGGCA TCATCTTCCC ACCCGTGCCC GGCTTCTATC ACCGCCCACA GTCAATCAAC
GAGATGGTGG ATCACAGCGT GAGCCGGGTC ATTGATTTGC TGGGTCTGCC GCAACCCGAC
GCGACGCGCT GGACGGGCCT GGCCTCGTAG
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| Protein sequence | MKRVIVAISG ASGAVYGVRL LQMLRGMQGV QTHLTVSEAG WLNVQQELDM ARAEVEALAD
VVYPVQNVGA AIASGSFQCD GMVVAPCAMR TLAAVALGLS DNLITRAADV MLKERRRLIL
MVRETPLNLA HLRNMTSVTE MGGIIFPPVP GFYHRPQSIN EMVDHSVSRV IDLLGLPQPD
ATRWTGLAS
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