Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0126 |
Symbol | |
ID | 3960225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 130638 |
End bp | 131615 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637914964 |
Product | allophanate hydrolase |
Protein accession | YP_521418 |
Protein GI | 89898947 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1984] Allophanate hydrolase subunit 2 |
TIGRFAM ID | [TIGR00724] biotin-dependent carboxylase uncharacterized domain |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.254359 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAATTA AGGTACTACA ACCTGGACTT GCAACCACCG TACAGGATGC CGGTCGAATT GGTTATTACC ACTTGGGCAT TCCGCTTTCA GGCGCGCTTG ATCAGTACTC GTTTCGTGCT GCCAATCTCC TGGTCGGAAA TTCGGAAGAT GCCGCCACAC TCGAGATAAC GATGCTCGGC CCCAAGCTGG AGTTCATGCA TGATGCCGCC ATCGCACTGA CTGGTGCGAA CTTGCCGGCC AAGCTTGACG GCGTTCCCAT ACCCAACAAC CAAGTTGTCG CGGTCAAGGC GGGCAGCGTG CTTAGTTTTG ATTTTCTGAA AGACGGCGTG CGCGCCTACC TCGCCGTGGC CGGTGGCATT GATGTGCCGG AGGTGCTTGG CAGCCGTTCA ACTTACACCT TGGGGGCCAT CGGTGGTTTT TGTGGAAGAA AACTCCAAGC CGGTGATGTG TTGCCCGTGG GGGCTTTTCA GGGGCCATCG CACGTAGGCA AAAAGCTGCC AGATCATTTG AAGCAAGCCT TGCCCAAGCA GGTGCAGGTT CGCGTTCTTC CCGGCTTGTA TTTTCACTGG TTGACGCAGG CCTCTGGAAA GTCGTTTTTT GAAGATACAT GGCAGGTGGG CCCCGAAGCG GACCGCATCG GCTATCGATT CAAGCATGGC CGTCCGCTGG AATTTGAACC CCGCGAACGC CCCTTTGGGG CTGGTTCCGA CCCCTCCAAC ATCGTCGATG CGGGGTATCC CATTGGCTCG ATTCAAGTAC CTGGCGGTCT GGAGCCCATC GTTTTGCATC GCGATGCCGT GTCCGGCGGT GGCTACGCCA TGATTGGCAC GGTCATCAGT GCGGATATGG ATGTTGTAGC GCAGCTGCAG CCAAATTTTC AAACCCAATT TGTCGCGGTT GACATGGCGC AGGCCTTGAG TGCGCGCGCC AAACGCAATC AGCGCCTGGC TGATTTGCGA CAGGCTCTAT TGAATTGA
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Protein sequence | MAIKVLQPGL ATTVQDAGRI GYYHLGIPLS GALDQYSFRA ANLLVGNSED AATLEITMLG PKLEFMHDAA IALTGANLPA KLDGVPIPNN QVVAVKAGSV LSFDFLKDGV RAYLAVAGGI DVPEVLGSRS TYTLGAIGGF CGRKLQAGDV LPVGAFQGPS HVGKKLPDHL KQALPKQVQV RVLPGLYFHW LTQASGKSFF EDTWQVGPEA DRIGYRFKHG RPLEFEPRER PFGAGSDPSN IVDAGYPIGS IQVPGGLEPI VLHRDAVSGG GYAMIGTVIS ADMDVVAQLQ PNFQTQFVAV DMAQALSARA KRNQRLADLR QALLN
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