| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0120 |
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| Symbol | |
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| ID | 3960219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 123047 |
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| End bp | 124606 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637914958 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_521412 |
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| Protein GI | 89898941 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATGA ACCTCCCAGT CACCCAGCGG GAATTTGATT ACCCTGCTGA ACACATGCTT
GTCTCCACGA CAGATAGCAA GGGTTTCATC ACGCACTGCA ACCGCGCGTT CGTCGCCGTC
AGCGGCTATA CCTACGATGA GTTGATCGGG CAAAACCACA ATTTGATACG CCACCCCGAC
ATGCCCGCAG CAGCTTTCAA AGACTTGTGG AGCAGCGTCG GGCGGGGCCG GCCCTGGACC
GGCATGGTCA AAAACCGTCG CGCGGATGGC GACCATTACT GGGTGCAGGC CAACGTCACG
CCGATCATGG AAAACGGCAA GCCCCGAGGC TACATGTCGG TGCGGATCAA GCCCTCACGC
CAGGAAATCA AGGCCGCCGA GGGTCTGTAT GCGCAGATGA ATGCCGCCCA AGAATCGGGC
AAGCTGCCGT TCCACCTGCA GGGCGGCCAG GTGCACTACA AGGGCGTGCG GGGCATGGCC
GGGCGCATCC GGCGCATGAC GCTGACCAGC CGCCTGGGCC TGGCGCTGGG CTTCATGATC
GCACTGGGCA TGCTGCCGCA ATGGCTGGAC CTTCAGGGCA TGTCGGGCCT GGGCCTGAAG
TTGGGCAGTT TGCTGGCCGG CGCCGCGCTG GTGCTGCTCT GGTTCCACAA AAACTTTGAC
ACCGCGATGG GCGAAGCCGG GCGTTTTGCC GACGATCTGG CGGGCTGCAA TCTGACCACG
TCCGTTGCCA CCCACTTTCC GCCGCCCCTG GATTCCCTGA TCCGCAGCTT GCGCCAAATC
CAGGCCAACC TGCAAGCCGT GGTGGGCGAC GTGCGGGGCG AGATTGCGAG CTTCACCCGG
TCGGCGGCAG AAATTGCGGC CGGCAGCCTC AATCTCTCGG CGCGCACCGA GTCGCAGGCC
AGCAGCCTGC AGCAGACCGC TGCCTCCATG GAGGAAATCT CCAGTACCGT CAGGCAGACG
GCGGACACGG CCGCGCAAGT TTCGGCACAA AGCGCCATCA GCACCCGTGT GGCCACGCGA
GGCGGTGAAG CCATGCACCA GGTCGGACTG GCCATGCAGG CCATTGAGTC CTCGTCGACC
GAGGTGCGCG AAATTGTTGA CGTGATTGAG GGCATTGCCT TTCAAACCAA TATCCTGGCA
CTCAATGCCG CGGTGGAGGC CGCCCGTGCC GGCGAGCAAG GGCGAGGTTT TGCCGTGGTG
GCCGCCGAGG TGCGGGCGCT GGCCACGCGC AGCGCCGTGG CAGCCAAGGA GATCCGGACC
CTGATCGCCC AATCGGTCGA CCAGATTTCA CAGGTTACCC AGCAGATGAC CGGCGCCGGC
GACACCATTG ATGAGGTGGT GCAATCGGTC CGGCAGGTGG GTGAACTCAT CCAGCAGATC
AGCAACACCA CGCAGGAGCA ATCCTTGGGC ATTTCGCAGG TCAACGAAGC GGTCATACAG
CTCGATGCGG TGACCCAGCA AAATGCAGCG CTGGTGGAAG AATCGGCGGC CTCGGCCAAC
GGACTCAGTG ACAGCGCCGT CACGCTGGCG CGCTCGGTGC AGGTGTTCCG CCTGGGTTGA
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| Protein sequence | MRMNLPVTQR EFDYPAEHML VSTTDSKGFI THCNRAFVAV SGYTYDELIG QNHNLIRHPD
MPAAAFKDLW SSVGRGRPWT GMVKNRRADG DHYWVQANVT PIMENGKPRG YMSVRIKPSR
QEIKAAEGLY AQMNAAQESG KLPFHLQGGQ VHYKGVRGMA GRIRRMTLTS RLGLALGFMI
ALGMLPQWLD LQGMSGLGLK LGSLLAGAAL VLLWFHKNFD TAMGEAGRFA DDLAGCNLTT
SVATHFPPPL DSLIRSLRQI QANLQAVVGD VRGEIASFTR SAAEIAAGSL NLSARTESQA
SSLQQTAASM EEISSTVRQT ADTAAQVSAQ SAISTRVATR GGEAMHQVGL AMQAIESSST
EVREIVDVIE GIAFQTNILA LNAAVEAARA GEQGRGFAVV AAEVRALATR SAVAAKEIRT
LIAQSVDQIS QVTQQMTGAG DTIDEVVQSV RQVGELIQQI SNTTQEQSLG ISQVNEAVIQ
LDAVTQQNAA LVEESAASAN GLSDSAVTLA RSVQVFRLG
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